Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20990
Experiment: R2A with Paraquat dichloride 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Paraquat dichloride 0.003 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,171,851 | - | -1.2 | |||
5,171,908 | + | +0.0 | |||
5,172,014 | + | -0.6 | |||
5,172,064 | - | CA265_RS20990 | 0.11 | +0.4 | |
5,172,109 | - | CA265_RS20990 | 0.21 | +0.8 | |
5,172,320 | - | CA265_RS20990 | 0.68 | +2.0 | |
5,172,322 | - | CA265_RS20990 | 0.69 | +0.4 | |
5,172,472 | - | -0.5 | |||
5,173,220 | + | -2.2 | |||
5,173,262 | + | +0.1 | |||
5,173,307 | + | -1.6 | |||
5,173,320 | + | -1.8 | |||
5,173,352 | + | CA265_RS21000 | 0.16 | -1.2 | |
5,173,374 | + | CA265_RS21000 | 0.22 | -1.3 | |
5,173,374 | + | CA265_RS21000 | 0.22 | -3.0 | |
5,173,425 | + | CA265_RS21000 | 0.36 | -2.9 |
Or see this region's nucleotide sequence