Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15950
Experiment: R2A with Paraquat dichloride 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Paraquat dichloride 0.003 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,003,038 | - | +2.3 | |||
4,003,056 | - | +0.2 | |||
4,003,195 | - | CA265_RS15945 | 0.19 | -0.7 | |
4,003,246 | - | CA265_RS15945 | 0.25 | -2.3 | |
4,003,273 | - | CA265_RS15945 | 0.28 | -2.5 | |
4,003,285 | - | CA265_RS15945 | 0.29 | -1.0 | |
4,003,327 | - | CA265_RS15945 | 0.34 | -1.3 | |
4,003,443 | - | CA265_RS15945 | 0.47 | -2.3 | |
4,003,491 | - | CA265_RS15945 | 0.53 | -1.6 | |
4,003,557 | - | CA265_RS15945 | 0.61 | -0.6 | |
4,003,859 | - | -0.5 | |||
4,003,913 | + | -2.0 | |||
4,003,913 | + | -2.0 | |||
4,003,990 | + | -1.1 | |||
4,005,416 | - | +0.9 | |||
4,005,481 | - | +1.9 |
Or see this region's nucleotide sequence