Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13290

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
3,300,067	+		CA265_RS13285	0.55	-1.8
3,300,144	+		CA265_RS13285	0.61	+0.2
3,300,145	-		CA265_RS13285	0.61	-1.9
3,300,157	+		CA265_RS13285	0.62	-0.6
3,300,169	-		CA265_RS13285	0.63	+0.4
3,300,179	+		CA265_RS13285	0.63	-0.4
3,300,180	-		CA265_RS13285	0.64	-0.6
3,300,180	-		CA265_RS13285	0.64	-0.9
3,300,180	-		CA265_RS13285	0.64	+0.7
3,300,243	+		CA265_RS13285	0.68	-0.4
3,300,268	-		CA265_RS13285	0.70	+0.8
3,300,294	+		CA265_RS13285	0.72	-1.5
3,300,307	-		CA265_RS13285	0.73	+0.2
3,300,308	+		CA265_RS13285	0.73	+0.4
3,300,309	-		CA265_RS13285	0.73	+2.7
3,300,554	+				-1.6
3,300,555	-				+0.4
3,300,583	+				-0.4
3,300,583	+				+0.8
3,300,594	+				-0.2
3,300,620	-				-2.1
3,300,708	+				-0.6
3,300,708	+				-1.4
3,300,851	-				+0.7
3,300,874	-				+2.2
3,300,909	+				+0.4
3,300,909	+				-0.8
3,300,917	-				-0.9
3,300,961	+				-0.1
3,301,118	+				-0.0
3,301,124	+				-0.5
3,301,124	+				-0.4
3,301,124	+				+0.0
3,301,125	-				+1.1
3,301,229	-				+0.1
3,301,229	-				+0.8
3,301,229	-				-0.7
3,301,252	+				-0.5
3,301,253	-				+1.1
3,301,372	-				-0.5
3,301,382	-				-0.1
3,301,385	+				+1.1
3,301,385	+				+1.8
3,301,386	-				+0.5
3,301,386	-				+0.7
3,301,406	+				-0.8
3,301,474	-				-0.2
3,301,534	+		CA265_RS13295	0.11	-0.7
3,301,552	+		CA265_RS13295	0.12	-0.2
3,301,617	-		CA265_RS13295	0.15	+0.1
3,301,678	+		CA265_RS13295	0.17	+0.7
3,301,678	+		CA265_RS13295	0.17	+0.1
3,301,784	-		CA265_RS13295	0.21	-0.3
3,301,784	-		CA265_RS13295	0.21	-0.6
3,301,825	-		CA265_RS13295	0.23	-0.2
3,301,862	+		CA265_RS13295	0.25	+0.3
3,301,862	+		CA265_RS13295	0.25	+0.6
3,301,918	-		CA265_RS13295	0.27	-0.0
3,301,939	+		CA265_RS13295	0.28	-0.0
3,301,940	-		CA265_RS13295	0.28	-0.1
3,301,941	+		CA265_RS13295	0.28	+0.6
3,302,012	-		CA265_RS13295	0.31	-0.5