Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13185
Experiment: R2A with Paraquat dichloride 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Paraquat dichloride 0.003 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,281,944 | - | -2.6 | |||
3,281,963 | - | -0.5 | |||
3,282,035 | - | +0.4 | |||
3,282,038 | - | +2.2 | |||
3,283,456 | + | CA265_RS13190 | 0.12 | +0.9 | |
3,283,456 | + | CA265_RS13190 | 0.12 | +2.3 | |
3,283,491 | + | CA265_RS13190 | 0.25 | +1.9 | |
3,283,492 | - | CA265_RS13190 | 0.25 | +0.4 | |
3,283,508 | + | CA265_RS13190 | 0.31 | +1.2 | |
3,283,509 | - | CA265_RS13190 | 0.32 | -0.3 | |
3,283,547 | - | CA265_RS13190 | 0.46 | -0.1 | |
3,283,547 | - | CA265_RS13190 | 0.46 | -0.2 | |
3,283,578 | - | CA265_RS13190 | 0.58 | +0.1 | |
3,283,589 | + | CA265_RS13190 | 0.62 | +1.9 | |
3,283,652 | + | CA265_RS13190 | 0.86 | +2.7 | |
3,283,692 | + | +0.7 | |||
3,283,704 | + | +1.2 | |||
3,283,713 | - | +2.3 | |||
3,283,714 | + | +1.7 | |||
3,283,714 | + | +2.1 | |||
3,283,791 | + | +4.4 | |||
3,283,791 | + | +5.3 | |||
3,284,056 | - | CA265_RS13195 | 0.42 | +4.8 | |
3,284,085 | - | CA265_RS13195 | 0.46 | +6.3 |
Or see this region's nucleotide sequence