Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12045

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
2,979,993	+		CA265_RS12040	0.30	+0.5
2,980,010	+		CA265_RS12040	0.32	-0.0
2,980,013	+		CA265_RS12040	0.32	+0.2
2,980,013	+		CA265_RS12040	0.32	+0.2
2,980,014	-		CA265_RS12040	0.32	-0.2
2,980,058	+		CA265_RS12040	0.36	+0.4
2,980,058	+		CA265_RS12040	0.36	-0.2
2,980,059	-		CA265_RS12040	0.36	+1.1
2,980,083	-		CA265_RS12040	0.38	-1.4
2,980,112	-		CA265_RS12040	0.41	+0.0
2,980,187	-		CA265_RS12040	0.47	-0.3
2,980,241	-		CA265_RS12040	0.52	+0.6
2,980,319	-		CA265_RS12040	0.59	+0.1
2,980,333	+		CA265_RS12040	0.60	+0.3
2,980,370	-		CA265_RS12040	0.63	-0.7
2,980,383	+		CA265_RS12040	0.64	+0.2
2,980,433	-		CA265_RS12040	0.68	-0.1
2,980,488	+		CA265_RS12040	0.73	-0.7
2,980,563	+		CA265_RS12040	0.80	-0.7
2,980,564	-		CA265_RS12040	0.80	+0.5
2,980,790	-				+1.2
2,980,811	-				+0.6
2,980,867	+				-0.9
2,980,869	+				+0.2
2,980,869	+				+0.5
2,980,869	+				-1.4
2,980,883	-				+0.6
2,980,894	+				-1.5
2,980,904	+				-0.7
2,980,904	+				+0.7
2,980,904	+				-1.2
2,980,904	+				+0.0
2,980,905	-				-0.8
2,980,905	-				+0.1
2,980,950	-				-0.1
2,980,974	+				-1.0
2,980,974	+				-0.1
2,981,056	+		CA265_RS12045	0.22	-0.2
2,981,057	-		CA265_RS12045	0.22	+0.7
2,981,069	+		CA265_RS12045	0.25	-2.0
2,981,138	-		CA265_RS12045	0.41	-0.7
2,981,212	+		CA265_RS12045	0.59	-1.3
2,981,212	+		CA265_RS12045	0.59	-0.8
2,981,212	+		CA265_RS12045	0.59	+0.7
2,981,212	+		CA265_RS12045	0.59	-0.3
2,981,212	+		CA265_RS12045	0.59	-0.7
2,981,213	-		CA265_RS12045	0.59	+0.1
2,981,215	-		CA265_RS12045	0.60	-0.4
2,981,292	-		CA265_RS12045	0.78	-0.6
2,981,381	-				+0.5
2,981,381	-				-0.5
2,981,490	+		CA265_RS12050	0.15	+0.0
2,981,490	+		CA265_RS12050	0.15	+0.4
2,981,523	+		CA265_RS12050	0.19	-0.2
2,981,524	-		CA265_RS12050	0.20	-2.2
2,981,536	-		CA265_RS12050	0.21	-0.3
2,981,566	-		CA265_RS12050	0.25	-0.1
2,981,575	+		CA265_RS12050	0.26	-0.7
2,981,741	-		CA265_RS12050	0.48	-0.8
2,981,747	+		CA265_RS12050	0.49	+0.1
2,981,780	+		CA265_RS12050	0.53	+0.5
2,981,783	-		CA265_RS12050	0.54	+0.8
2,981,783	-		CA265_RS12050	0.54	+0.7
2,981,783	-		CA265_RS12050	0.54	-1.3
2,981,837	+		CA265_RS12050	0.61	-0.0
2,981,911	+		CA265_RS12050	0.70	-0.8
2,982,028	-		CA265_RS12050	0.86	+0.2
2,982,032	+		CA265_RS12050	0.86	-0.0
2,982,033	-		CA265_RS12050	0.86	-1.5
2,982,064	-				+0.2
2,982,089	+				-0.3
2,982,111	+				-0.2
2,982,154	+				+0.3
2,982,300	+				-1.0
2,982,300	+				-0.2
2,982,301	-				+1.5