Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09845

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
2,427,231	-		CA265_RS09835	0.86	+1.3
2,427,231	-		CA265_RS09835	0.86	+1.2
2,427,419	+				+0.4
2,427,439	+				-0.5
2,427,561	-		CA265_RS09840	0.34	+2.2
2,427,690	-		CA265_RS09840	0.60	+2.0
2,427,690	-		CA265_RS09840	0.60	+0.8
2,427,823	+		CA265_RS09840	0.87	+0.7
2,427,824	-		CA265_RS09840	0.87	-0.3
2,427,867	+				+2.4
2,427,869	+				+0.8
2,427,869	+				+0.0
2,427,882	-				+0.5
2,427,886	-				-0.0
2,427,893	-				-2.3
2,427,938	-				-0.0
2,427,938	-				+0.3
2,427,951	+				+0.2
2,428,009	+				+1.2
2,428,010	-				+1.0
2,428,116	+		CA265_RS09845	0.11	-1.4
2,428,131	+		CA265_RS09845	0.14	-2.0
2,428,132	-		CA265_RS09845	0.15	-0.0
2,428,132	-		CA265_RS09845	0.15	-0.1
2,428,132	-		CA265_RS09845	0.15	+0.0
2,428,139	+		CA265_RS09845	0.16	+0.0
2,428,140	-		CA265_RS09845	0.16	-1.4
2,428,143	+		CA265_RS09845	0.17	+0.4
2,428,149	+		CA265_RS09845	0.18	+0.4
2,428,150	-		CA265_RS09845	0.19	-1.5
2,428,172	-		CA265_RS09845	0.23	-0.4
2,428,189	-		CA265_RS09845	0.27	-0.2
2,428,307	-		CA265_RS09845	0.54	+0.2
2,428,408	-		CA265_RS09845	0.76	-0.4
2,428,424	+		CA265_RS09845	0.80	+0.2
2,428,425	-		CA265_RS09845	0.80	-1.0
2,428,474	+				+0.9
2,428,475	-				+1.0
2,428,475	-				-0.0
2,428,491	+				+0.4
2,428,493	+				+0.4
2,428,493	+				+0.3
2,428,553	+				+0.8
2,428,582	+				+0.3
2,428,683	-		CA265_RS09850	0.19	-2.3
2,428,709	+		CA265_RS09850	0.23	+1.0
2,428,921	+		CA265_RS09850	0.58	-0.1
2,428,925	+		CA265_RS09850	0.59	+0.3
2,429,007	+		CA265_RS09850	0.73	+0.5
2,429,007	+		CA265_RS09850	0.73	-0.1
2,429,044	+		CA265_RS09850	0.79	+0.3
2,429,088	-		CA265_RS09850	0.86	-1.5
2,429,102	+		CA265_RS09850	0.89	-0.1
2,429,106	-		CA265_RS09850	0.89	-0.6
2,429,152	+				+0.0
2,429,221	+				-0.4
2,429,221	+				+1.0
2,429,251	+				+1.5
2,429,252	-				-0.1
2,429,284	+				-0.3
2,429,385	+				-0.4
2,429,385	+				-0.7
2,429,397	+				-0.1
2,429,397	+				+0.2
2,429,423	+				+0.5
2,429,509	-				-0.5