Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09620

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
2,377,012	-		CA265_RS09610	0.21	-0.3
2,377,065	+		CA265_RS09610	0.33	-1.0
2,377,065	+		CA265_RS09610	0.33	+0.6
2,377,066	-		CA265_RS09610	0.33	+0.3
2,377,066	-		CA265_RS09610	0.33	+0.9
2,377,099	+		CA265_RS09610	0.41	+0.4
2,377,208	+		CA265_RS09610	0.66	+0.3
2,377,209	-		CA265_RS09610	0.66	+0.2
2,377,209	-		CA265_RS09610	0.66	+1.7
2,377,230	+		CA265_RS09610	0.71	+0.2
2,377,248	+		CA265_RS09610	0.75	+0.8
2,377,306	-		CA265_RS09610	0.88	+0.9
2,377,429	+				-0.1
2,377,520	+		CA265_RS09615	0.18	-0.0
2,377,570	+		CA265_RS09615	0.28	-1.3
2,377,589	+		CA265_RS09615	0.32	+2.1
2,377,658	+		CA265_RS09615	0.46	+0.1
2,377,659	-		CA265_RS09615	0.46	+1.5
2,377,681	+		CA265_RS09615	0.51	-0.9
2,377,698	-		CA265_RS09615	0.54	+2.1
2,377,702	+		CA265_RS09615	0.55	+0.3
2,377,765	+		CA265_RS09615	0.68	-0.2
2,377,782	-		CA265_RS09615	0.72	-0.2
2,377,846	-		CA265_RS09615	0.85	-0.3
2,377,913	-				+0.1
2,377,913	-				-0.3
2,377,976	+				+0.5
2,377,995	+				+0.5
2,378,021	+				+1.5
2,378,022	-				+0.8
2,378,061	-				-0.2
2,378,211	+		CA265_RS09620	0.18	+0.8
2,378,212	-		CA265_RS09620	0.18	+1.3
2,378,264	-		CA265_RS09620	0.21	+1.1
2,378,328	-		CA265_RS09620	0.26	+1.0
2,378,340	-		CA265_RS09620	0.27	+0.7
2,378,341	+		CA265_RS09620	0.27	+1.1
2,378,341	+		CA265_RS09620	0.27	+2.1
2,378,452	-		CA265_RS09620	0.35	+1.9
2,378,559	-		CA265_RS09620	0.42	+1.2
2,378,601	-		CA265_RS09620	0.45	+1.5
2,378,676	-		CA265_RS09620	0.51	+0.8
2,378,691	+		CA265_RS09620	0.52	-1.1
2,378,754	-		CA265_RS09620	0.56	+0.4
2,378,786	+		CA265_RS09620	0.58	+1.4
2,378,805	+		CA265_RS09620	0.60	+0.6
2,378,810	+		CA265_RS09620	0.60	+1.6
2,378,867	+		CA265_RS09620	0.64	+1.3
2,378,888	-		CA265_RS09620	0.66	+1.2
2,378,888	-		CA265_RS09620	0.66	+1.4
2,378,922	+		CA265_RS09620	0.68	+0.9
2,379,002	+		CA265_RS09620	0.74	+1.1
2,379,036	-		CA265_RS09620	0.76	+1.1
2,379,284	+				+1.4
2,379,360	-				-0.0
2,379,741	-				-0.7
2,379,750	-				-2.1
2,379,780	+				-0.7
2,379,782	+				+0.3
2,379,830	+				+0.2
2,379,849	+				+0.3
2,379,850	-				-2.9
2,379,850	-				-2.7
2,379,880	-				-0.7
2,379,880	-				-1.3
2,379,934	+				-1.2
2,379,993	+		CA265_RS09630	0.12	+0.0
2,380,025	-		CA265_RS09630	0.15	-0.8
2,380,064	+		CA265_RS09630	0.18	+0.3
2,380,077	+		CA265_RS09630	0.19	+1.2
2,380,078	-		CA265_RS09630	0.19	-2.1
2,380,098	+		CA265_RS09630	0.21	-0.5
2,380,101	-		CA265_RS09630	0.21	-0.5
2,380,101	-		CA265_RS09630	0.21	-1.6
2,380,107	+		CA265_RS09630	0.21	+0.2
2,380,108	-		CA265_RS09630	0.21	-1.9
2,380,188	+		CA265_RS09630	0.28	-0.2
2,380,198	-		CA265_RS09630	0.29	-0.8
2,380,203	+		CA265_RS09630	0.29	+0.4