Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09300

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
2,313,054	-		CA265_RS09295	0.36	+0.8
2,313,086	+		CA265_RS09295	0.39	-1.0
2,313,100	-		CA265_RS09295	0.40	+0.8
2,313,105	-		CA265_RS09295	0.40	+0.1
2,313,147	-		CA265_RS09295	0.43	-0.1
2,313,195	+		CA265_RS09295	0.47	-1.0
2,313,290	+		CA265_RS09295	0.54	-1.0
2,313,390	-		CA265_RS09295	0.62	-0.2
2,313,485	+		CA265_RS09295	0.70	-2.9
2,313,693	-		CA265_RS09295	0.86	-0.1
2,313,753	-				-0.1
2,313,826	+				-1.0
2,313,848	+				-1.0
2,313,849	-				+0.6
2,313,858	+				-2.6
2,313,923	+				+0.2
2,313,924	-				+0.1
2,313,924	-				+1.0
2,313,943	+				-0.1
2,313,997	-				-0.5
2,314,008	+		CA265_RS09300	0.11	+0.2
2,314,008	+		CA265_RS09300	0.11	-0.3
2,314,009	-		CA265_RS09300	0.11	+1.1
2,314,073	+		CA265_RS09300	0.18	-0.9
2,314,074	-		CA265_RS09300	0.19	-0.2
2,314,100	-		CA265_RS09300	0.22	-0.2
2,314,117	-		CA265_RS09300	0.24	-0.9
2,314,117	-		CA265_RS09300	0.24	+0.5
2,314,128	+		CA265_RS09300	0.25	+0.6
2,314,154	+		CA265_RS09300	0.28	+0.8
2,314,182	+		CA265_RS09300	0.31	+0.4
2,314,237	+		CA265_RS09300	0.38	+1.1
2,314,271	+		CA265_RS09300	0.41	+1.3
2,314,398	+		CA265_RS09300	0.56	+1.1
2,314,402	+		CA265_RS09300	0.57	-0.4
2,314,410	+		CA265_RS09300	0.58	-1.0
2,314,412	+		CA265_RS09300	0.58	-0.7
2,314,458	+		CA265_RS09300	0.63	+0.5
2,314,459	-		CA265_RS09300	0.63	+0.4
2,314,562	-		CA265_RS09300	0.75	+1.1
2,314,572	-		CA265_RS09300	0.76	+1.4
2,314,572	-		CA265_RS09300	0.76	+1.0
2,314,640	-		CA265_RS09300	0.84	+0.2
2,314,641	+		CA265_RS09300	0.84	-0.0
2,314,642	-		CA265_RS09300	0.85	+1.2
2,314,647	-		CA265_RS09300	0.85	+0.5
2,314,650	+		CA265_RS09300	0.85	+0.5
2,314,651	-		CA265_RS09300	0.86	+0.0
2,314,672	-		CA265_RS09300	0.88	+0.0
2,314,672	-		CA265_RS09300	0.88	+0.9
2,314,801	+				+0.6
2,314,930	-		CA265_RS09305	0.17	+0.5
2,314,958	-		CA265_RS09305	0.20	+2.4
2,315,037	-		CA265_RS09305	0.29	+1.1
2,315,091	-		CA265_RS09305	0.35	+0.8
2,315,095	-		CA265_RS09305	0.36	+1.2
2,315,110	-		CA265_RS09305	0.37	+0.8
2,315,110	-		CA265_RS09305	0.37	+0.4
2,315,166	-		CA265_RS09305	0.43	+0.6
2,315,213	+		CA265_RS09305	0.49	-0.4
2,315,240	+				+1.7
2,315,246	+		CA265_RS09305	0.52	+1.2
2,315,246	+		CA265_RS09305	0.52	+1.1
2,315,366	+		CA265_RS09305	0.66	+0.3
2,315,392	+		CA265_RS09305	0.68	+0.4
2,315,393	-		CA265_RS09305	0.69	+1.0
2,315,393	-		CA265_RS09305	0.69	+1.0
2,315,405	+		CA265_RS09305	0.70	+0.2
2,315,417	+		CA265_RS09305	0.71	+0.5
2,315,439	+		CA265_RS09305	0.74	+0.9
2,315,458	+		CA265_RS09305	0.76	+0.1
2,315,459	-		CA265_RS09305	0.76	+0.7
2,315,462	+		CA265_RS09305	0.76	-0.2
2,315,471	+		CA265_RS09305	0.77	+1.1
2,315,472	-		CA265_RS09305	0.77	+0.5
2,315,491	-		CA265_RS09305	0.79	+1.0
2,315,544	-		CA265_RS09305	0.85	-0.5
2,315,544	-		CA265_RS09305	0.85	+0.0
2,315,546	+		CA265_RS09305	0.85	+0.7
2,315,589	+				+1.1
2,315,622	+				+0.7
2,315,628	-				+0.1
2,315,694	+				+0.5
2,315,718	-				-0.1
2,315,734	-				+0.1
2,315,760	-				+0.7