Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09290

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
2,311,077	-		CA265_RS09280	0.41	+0.2
2,311,277	+		CA265_RS09280	0.83	+0.2
2,311,278	-		CA265_RS09280	0.83	-0.7
2,311,292	+		CA265_RS09280	0.86	-0.1
2,311,336	-				+0.0
2,311,414	+				-0.1
2,311,512	+		CA265_RS09285	0.23	+0.6
2,311,513	-		CA265_RS09285	0.23	+0.9
2,311,572	-		CA265_RS09285	0.33	-0.6
2,311,592	+		CA265_RS09285	0.36	+0.2
2,311,593	-		CA265_RS09285	0.36	-0.3
2,311,596	+		CA265_RS09285	0.37	-0.2
2,311,597	-		CA265_RS09285	0.37	+0.2
2,311,597	-		CA265_RS09285	0.37	-0.8
2,311,597	-		CA265_RS09285	0.37	-0.4
2,311,724	-		CA265_RS09285	0.58	-0.3
2,311,724	-		CA265_RS09285	0.58	+0.1
2,311,786	-		CA265_RS09285	0.68	-0.1
2,311,887	+		CA265_RS09285	0.85	+0.2
2,311,952	+				-0.4
2,311,952	+				+0.4
2,311,952	+				-0.2
2,311,970	-				+1.1
2,311,981	-				+0.8
2,311,985	+				+0.1
2,311,985	+				-0.0
2,312,082	+		CA265_RS09290	0.10	+0.5
2,312,082	+		CA265_RS09290	0.10	+0.4
2,312,082	+		CA265_RS09290	0.10	-0.7
2,312,086	+		CA265_RS09290	0.11	-0.5
2,312,086	+		CA265_RS09290	0.11	-0.5
2,312,086	+		CA265_RS09290	0.11	+0.2
2,312,087	-		CA265_RS09290	0.11	+0.1
2,312,087	-		CA265_RS09290	0.11	+0.1
2,312,092	+		CA265_RS09290	0.12	-0.1
2,312,092	+		CA265_RS09290	0.12	+0.5
2,312,092	+		CA265_RS09290	0.12	-0.1
2,312,098	+		CA265_RS09290	0.13	+0.5
2,312,192	+		CA265_RS09290	0.33	-0.5
2,312,244	-		CA265_RS09290	0.43	+0.5
2,312,245	+		CA265_RS09290	0.43	-0.7
2,312,457	+		CA265_RS09290	0.87	-1.5
2,312,483	-				-0.7
2,312,559	+				-1.9
2,312,560	-				-1.4
2,312,560	-				-0.0
2,312,607	-				+0.1
2,312,870	+		CA265_RS09295	0.22	-0.7
2,313,054	-		CA265_RS09295	0.36	+0.8
2,313,086	+		CA265_RS09295	0.39	-1.0
2,313,100	-		CA265_RS09295	0.40	+0.8
2,313,105	-		CA265_RS09295	0.40	+0.1
2,313,147	-		CA265_RS09295	0.43	-0.1
2,313,195	+		CA265_RS09295	0.47	-1.0
2,313,290	+		CA265_RS09295	0.54	-1.0
2,313,390	-		CA265_RS09295	0.62	-0.2
2,313,485	+		CA265_RS09295	0.70	-2.9