Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06705

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
1,654,320	-		CA265_RS06700	0.43	+0.7
1,654,375	+		CA265_RS06700	0.46	-0.3
1,654,376	-		CA265_RS06700	0.47	-0.4
1,654,384	+		CA265_RS06700	0.47	+0.1
1,654,403	-		CA265_RS06700	0.48	-0.7
1,654,483	+		CA265_RS06700	0.54	-0.5
1,654,484	-		CA265_RS06700	0.54	-1.1
1,654,484	-		CA265_RS06700	0.54	+0.8
1,654,668	+		CA265_RS06700	0.66	+0.1
1,654,669	-		CA265_RS06700	0.66	-0.9
1,654,669	-		CA265_RS06700	0.66	-0.1
1,654,669	-		CA265_RS06700	0.66	+0.1
1,654,669	-		CA265_RS06700	0.66	-2.0
1,654,674	-		CA265_RS06700	0.66	-0.8
1,654,681	+		CA265_RS06700	0.67	-0.1
1,654,682	-		CA265_RS06700	0.67	-0.8
1,654,710	-		CA265_RS06700	0.69	+0.5
1,654,878	+		CA265_RS06700	0.80	-0.2
1,654,878	+		CA265_RS06700	0.80	+0.5
1,654,879	-		CA265_RS06700	0.80	-2.1
1,654,879	-		CA265_RS06700	0.80	-2.2
1,654,879	-		CA265_RS06700	0.80	+0.4
1,654,879	-		CA265_RS06700	0.80	-0.8
1,654,879	-		CA265_RS06700	0.80	-0.0
1,654,901	+		CA265_RS06700	0.81	-0.7
1,654,902	-		CA265_RS06700	0.81	+1.1
1,654,940	-		CA265_RS06700	0.84	+0.4
1,654,951	+		CA265_RS06700	0.85	+0.1
1,655,022	-		CA265_RS06700	0.89	-0.7
1,655,057	-				-0.5
1,655,057	-				-0.8
1,655,063	+				-0.3
1,655,064	-				-0.0
1,655,091	-				-0.6
1,655,277	-				-0.2
1,655,281	-				+0.1
1,655,310	+				+1.4
1,655,310	+				+0.4
1,655,315	-		CA265_RS06705	0.11	+0.1
1,655,344	+		CA265_RS06705	0.22	-1.1
1,655,349	+		CA265_RS06705	0.24	-0.4
1,655,362	+		CA265_RS06705	0.29	+0.3
1,655,422	+		CA265_RS06705	0.51	-0.8
1,655,423	-		CA265_RS06705	0.51	+0.0
1,655,432	+				+0.0
1,655,435	+		CA265_RS06705	0.56	+1.0
1,655,435	+		CA265_RS06705	0.56	+0.7
1,655,504	+		CA265_RS06705	0.81	+0.6
1,655,505	-		CA265_RS06705	0.82	+0.7
1,655,605	+				-0.2
1,655,605	+				+0.1
1,655,624	+				-0.1
1,655,625	-				-0.5
1,655,625	-				-1.1
1,655,633	+				+0.8
1,655,634	-				+0.2
1,655,735	-				+0.6
1,655,760	+				-0.1
1,655,760	+				-0.5
1,655,761	-				-1.3
1,655,765	+				+0.4
1,655,791	+				+0.2
1,655,792	-		CA265_RS06710	0.10	-0.4
1,655,794	-		CA265_RS06710	0.11	+1.5
1,655,796	+		CA265_RS06710	0.11	-0.7
1,655,796	+		CA265_RS06710	0.11	+0.2
1,655,829	+		CA265_RS06710	0.19	-1.5
1,655,863	-		CA265_RS06710	0.27	+0.6
1,655,889	-		CA265_RS06710	0.33	-1.3
1,655,908	-		CA265_RS06710	0.38	-0.0
1,655,930	+		CA265_RS06710	0.43	+0.5
1,655,935	-		CA265_RS06710	0.44	+0.5
1,655,935	-		CA265_RS06710	0.44	-1.5
1,656,010	-		CA265_RS06710	0.62	-0.3
1,656,063	-		CA265_RS06710	0.74	+0.5
1,656,066	-		CA265_RS06710	0.75	-0.1
1,656,078	-		CA265_RS06710	0.78	-0.0
1,656,096	-		CA265_RS06710	0.82	+1.5
1,656,096	-		CA265_RS06710	0.82	-0.2
1,656,173	+				+1.5
1,656,239	-				-1.0
1,656,239	-				-0.8
1,656,248	-				-0.5
1,656,315	+				-1.7
1,656,449	+				+0.5
1,656,450	-				+0.5
1,656,452	+				-0.8
1,656,452	+				-0.5
1,656,496	-		CA265_RS06715	0.11	-1.7