Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS04440 and ABIE51_RS04445 are separated by 224 nucleotides ABIE51_RS04445 and ABIE51_RS04450 overlap by 4 nucleotides ABIE51_RS04450 and ABIE51_RS04455 overlap by 4 nucleotides ABIE51_RS04455 and ABIE51_RS04460 are separated by 42 nucleotides
ABIE51_RS04440: ABIE51_RS04440 - DUF4124 domain-containing protein, at 958,370 to 958,783
_RS04440
ABIE51_RS04445: ABIE51_RS04445 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 959,008 to 959,784
_RS04445
ABIE51_RS04450: ABIE51_RS04450 - alanine acetyltransferase, at 959,781 to 960,176
_RS04450
ABIE51_RS04455: ABIE51_RS04455 - ribosomal protein S18-alanine N-acetyltransferase, at 960,173 to 960,667
_RS04455
ABIE51_RS04460: ABIE51_RS04460 - hypothetical protein, at 960,710 to 961,177
_RS04460
Position (kb) 959
960
961 Strain fitness (log2 ratio) -2
-1
0
1 at 958.876 kb on + strand at 958.876 kb on + strand at 958.876 kb on + strand at 958.876 kb on + strand at 958.876 kb on + strand at 958.876 kb on + strand at 958.876 kb on + strand at 958.876 kb on + strand at 958.876 kb on + strand at 958.876 kb on + strand at 958.876 kb on + strand at 958.876 kb on + strand at 958.877 kb on - strand at 958.877 kb on - strand at 958.877 kb on - strand at 958.877 kb on - strand at 958.877 kb on - strand at 958.950 kb on + strand at 958.950 kb on + strand at 958.950 kb on + strand at 958.950 kb on + strand at 958.951 kb on - strand at 958.951 kb on - strand at 958.951 kb on - strand at 958.951 kb on - strand at 959.053 kb on + strand at 959.053 kb on + strand at 959.054 kb on - strand at 959.054 kb on - strand at 959.054 kb on - strand at 959.054 kb on - strand at 959.054 kb on - strand at 959.101 kb on + strand, within ABIE51_RS04445 at 959.233 kb on + strand, within ABIE51_RS04445 at 959.233 kb on + strand, within ABIE51_RS04445 at 959.234 kb on - strand, within ABIE51_RS04445 at 959.234 kb on - strand, within ABIE51_RS04445 at 959.287 kb on + strand, within ABIE51_RS04445 at 959.287 kb on + strand, within ABIE51_RS04445 at 959.287 kb on + strand, within ABIE51_RS04445 at 959.287 kb on + strand, within ABIE51_RS04445 at 959.287 kb on + strand, within ABIE51_RS04445 at 959.287 kb on + strand, within ABIE51_RS04445 at 959.287 kb on + strand, within ABIE51_RS04445 at 959.287 kb on + strand, within ABIE51_RS04445 at 959.287 kb on + strand, within ABIE51_RS04445 at 959.287 kb on + strand, within ABIE51_RS04445 at 959.287 kb on + strand, within ABIE51_RS04445 at 959.288 kb on - strand, within ABIE51_RS04445 at 959.288 kb on - strand, within ABIE51_RS04445 at 959.288 kb on - strand, within ABIE51_RS04445 at 959.288 kb on - strand, within ABIE51_RS04445 at 959.288 kb on - strand, within ABIE51_RS04445 at 959.362 kb on + strand, within ABIE51_RS04445 at 959.362 kb on + strand, within ABIE51_RS04445 at 959.481 kb on - strand, within ABIE51_RS04445 at 959.481 kb on - strand, within ABIE51_RS04445 at 959.481 kb on - strand, within ABIE51_RS04445 at 959.503 kb on + strand, within ABIE51_RS04445 at 959.581 kb on + strand, within ABIE51_RS04445 at 959.582 kb on - strand, within ABIE51_RS04445 at 959.710 kb on + strand at 959.711 kb on - strand at 959.711 kb on - strand at 959.732 kb on - strand at 959.732 kb on - strand at 960.278 kb on + strand, within ABIE51_RS04455 at 960.329 kb on + strand, within ABIE51_RS04455 at 960.371 kb on + strand, within ABIE51_RS04455 at 960.372 kb on - strand, within ABIE51_RS04455 at 960.372 kb on - strand, within ABIE51_RS04455 at 960.555 kb on - strand, within ABIE51_RS04455 at 960.596 kb on + strand, within ABIE51_RS04455 at 960.596 kb on + strand, within ABIE51_RS04455 at 960.597 kb on - strand, within ABIE51_RS04455 at 960.597 kb on - strand, within ABIE51_RS04455 at 960.906 kb on - strand, within ABIE51_RS04460 at 960.989 kb on + strand, within ABIE51_RS04460 at 960.989 kb on + strand, within ABIE51_RS04460 at 960.990 kb on - strand, within ABIE51_RS04460 at 960.990 kb on - strand, within ABIE51_RS04460 at 960.990 kb on - strand, within ABIE51_RS04460 at 960.990 kb on - strand, within ABIE51_RS04460 at 961.028 kb on + strand, within ABIE51_RS04460 at 961.028 kb on + strand, within ABIE51_RS04460 at 961.028 kb on + strand, within ABIE51_RS04460 at 961.028 kb on + strand, within ABIE51_RS04460 at 961.029 kb on - strand, within ABIE51_RS04460 at 961.029 kb on - strand, within ABIE51_RS04460 at 961.164 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 958,876 + +1.6 958,876 + +0.1 958,876 + -0.7 958,876 + -1.4 958,876 + +0.3 958,876 + +0.7 958,876 + +1.0 958,876 + +0.1 958,876 + +0.8 958,876 + +0.1 958,876 + +0.2 958,876 + +0.1 958,877 - -0.2 958,877 - -0.3 958,877 - -0.5 958,877 - -0.5 958,877 - -0.1 958,950 + +0.6 958,950 + -0.0 958,950 + -0.3 958,950 + +0.3 958,951 - -0.1 958,951 - -0.2 958,951 - +0.7 958,951 - +0.2 959,053 + +0.7 959,053 + +1.1 959,054 - -0.0 959,054 - +0.6 959,054 - -0.0 959,054 - +1.2 959,054 - +0.5 959,101 + ABIE51_RS04445 0.12 +0.1 959,233 + ABIE51_RS04445 0.29 +0.3 959,233 + ABIE51_RS04445 0.29 +1.2 959,234 - ABIE51_RS04445 0.29 -0.7 959,234 - ABIE51_RS04445 0.29 +0.7 959,287 + ABIE51_RS04445 0.36 +1.1 959,287 + ABIE51_RS04445 0.36 +0.0 959,287 + ABIE51_RS04445 0.36 -0.1 959,287 + ABIE51_RS04445 0.36 +0.6 959,287 + ABIE51_RS04445 0.36 +0.4 959,287 + ABIE51_RS04445 0.36 -0.1 959,287 + ABIE51_RS04445 0.36 -0.5 959,287 + ABIE51_RS04445 0.36 +0.2 959,287 + ABIE51_RS04445 0.36 +0.6 959,287 + ABIE51_RS04445 0.36 +0.3 959,287 + ABIE51_RS04445 0.36 +0.3 959,288 - ABIE51_RS04445 0.36 +1.1 959,288 - ABIE51_RS04445 0.36 -2.3 959,288 - ABIE51_RS04445 0.36 +0.6 959,288 - ABIE51_RS04445 0.36 +0.2 959,288 - ABIE51_RS04445 0.36 +0.1 959,362 + ABIE51_RS04445 0.46 -0.5 959,362 + ABIE51_RS04445 0.46 +0.1 959,481 - ABIE51_RS04445 0.61 +0.1 959,481 - ABIE51_RS04445 0.61 -0.9 959,481 - ABIE51_RS04445 0.61 +0.6 959,503 + ABIE51_RS04445 0.64 +0.4 959,581 + ABIE51_RS04445 0.74 +0.3 959,582 - ABIE51_RS04445 0.74 +0.1 959,710 + +0.0 959,711 - +0.7 959,711 - -0.5 959,732 - +0.9 959,732 - +0.3 960,278 + ABIE51_RS04455 0.21 -0.3 960,329 + ABIE51_RS04455 0.32 +1.1 960,371 + ABIE51_RS04455 0.40 -0.1 960,372 - ABIE51_RS04455 0.40 -0.3 960,372 - ABIE51_RS04455 0.40 +0.1 960,555 - ABIE51_RS04455 0.77 -0.2 960,596 + ABIE51_RS04455 0.85 +0.4 960,596 + ABIE51_RS04455 0.85 -0.4 960,597 - ABIE51_RS04455 0.86 -0.1 960,597 - ABIE51_RS04455 0.86 -0.8 960,906 - ABIE51_RS04460 0.42 -0.3 960,989 + ABIE51_RS04460 0.60 +0.5 960,989 + ABIE51_RS04460 0.60 -0.8 960,990 - ABIE51_RS04460 0.60 +0.4 960,990 - ABIE51_RS04460 0.60 -1.0 960,990 - ABIE51_RS04460 0.60 +0.0 960,990 - ABIE51_RS04460 0.60 +0.3 961,028 + ABIE51_RS04460 0.68 +0.5 961,028 + ABIE51_RS04460 0.68 +0.4 961,028 + ABIE51_RS04460 0.68 -0.8 961,028 + ABIE51_RS04460 0.68 +0.2 961,029 - ABIE51_RS04460 0.68 -1.4 961,029 - ABIE51_RS04460 0.68 -0.5 961,164 - +0.3
Or see this region's nucleotide sequence