Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01187 and SMc01186 are separated by 726 nucleotides SMc01186 and SMc01243 are separated by 253 nucleotides SMc01243 and SMc01185 are separated by 469 nucleotides
SMc01187: SMc01187 - rare lipoprotein A, at 1,742,755 to 1,743,795
SMc01187
SMc01186: SMc01186 - hypothetical protein, at 1,744,522 to 1,744,782
SMc01186
SMc01243: SMc01243 - tRNA-Ser, at 1,745,036 to 1,745,125
SMc01243
SMc01185: SMc01185 - signal peptide protein, at 1,745,595 to 1,747,082
SMc01185
Position (kb)
1744
1745 Strain fitness (log2 ratio)
-1
0
1 at 1744.021 kb on + strand at 1744.040 kb on + strand at 1744.067 kb on + strand at 1744.099 kb on + strand at 1744.099 kb on + strand at 1744.100 kb on - strand at 1744.100 kb on - strand at 1744.104 kb on + strand at 1744.104 kb on + strand at 1744.104 kb on + strand at 1744.104 kb on + strand at 1744.105 kb on - strand at 1744.107 kb on + strand at 1744.107 kb on + strand at 1744.249 kb on + strand at 1744.249 kb on + strand at 1744.249 kb on + strand at 1744.250 kb on - strand at 1744.250 kb on - strand at 1744.254 kb on + strand at 1744.264 kb on + strand at 1744.264 kb on + strand at 1744.311 kb on - strand at 1744.311 kb on - strand at 1744.343 kb on - strand at 1744.343 kb on - strand at 1744.375 kb on - strand at 1744.396 kb on + strand at 1744.550 kb on + strand, within SMc01186 at 1744.551 kb on - strand, within SMc01186 at 1744.551 kb on - strand, within SMc01186 at 1744.551 kb on - strand, within SMc01186 at 1744.579 kb on + strand, within SMc01186 at 1744.580 kb on - strand, within SMc01186 at 1744.775 kb on + strand at 1744.775 kb on + strand at 1744.776 kb on - strand at 1745.219 kb on - strand at 1745.219 kb on - strand at 1745.391 kb on - strand at 1745.478 kb on + strand at 1745.479 kb on - strand at 1745.479 kb on - strand at 1745.535 kb on + strand at 1745.536 kb on - strand at 1745.538 kb on + strand at 1745.538 kb on + strand at 1745.538 kb on + strand at 1745.763 kb on + strand, within SMc01185 at 1745.764 kb on - strand, within SMc01185 at 1745.766 kb on + strand, within SMc01185 at 1745.767 kb on - strand, within SMc01185
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 1,744,021 + -0.0 1,744,040 + +0.1 1,744,067 + -0.9 1,744,099 + -0.3 1,744,099 + -0.0 1,744,100 - +0.1 1,744,100 - -0.1 1,744,104 + -0.3 1,744,104 + -0.1 1,744,104 + +0.4 1,744,104 + +0.1 1,744,105 - -0.9 1,744,107 + -0.1 1,744,107 + -0.1 1,744,249 + +0.1 1,744,249 + -0.0 1,744,249 + +0.7 1,744,250 - +0.0 1,744,250 - -0.3 1,744,254 + -0.8 1,744,264 + +0.0 1,744,264 + -0.1 1,744,311 - +0.1 1,744,311 - -0.3 1,744,343 - +0.1 1,744,343 - -0.0 1,744,375 - -1.1 1,744,396 + -0.4 1,744,550 + SMc01186 0.11 +0.6 1,744,551 - SMc01186 0.11 +1.5 1,744,551 - SMc01186 0.11 +1.1 1,744,551 - SMc01186 0.11 +0.1 1,744,579 + SMc01186 0.22 -0.0 1,744,580 - SMc01186 0.22 +0.1 1,744,775 + -0.2 1,744,775 + +0.2 1,744,776 - +0.9 1,745,219 - +0.1 1,745,219 - +0.4 1,745,391 - -1.1 1,745,478 + -0.8 1,745,479 - -0.2 1,745,479 - -0.3 1,745,535 + +0.5 1,745,536 - +0.3 1,745,538 + -0.4 1,745,538 + -0.6 1,745,538 + -0.4 1,745,763 + SMc01185 0.11 -0.3 1,745,764 - SMc01185 0.11 -0.2 1,745,766 + SMc01185 0.11 -0.4 1,745,767 - SMc01185 0.12 +0.2
Or see this region's nucleotide sequence