Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00798 and SMc00799 are separated by 24 nucleotides SMc00799 and SMc00800 are separated by 110 nucleotides SMc00800 and SMc00801 are separated by 315 nucleotides
SMc00798: SMc00798 - hypothetical protein, at 818,874 to 819,122
SMc00798
SMc00799: SMc00799 - hypothetical protein, at 819,147 to 819,719
SMc00799
SMc00800: SMc00800 - hypothetical protein, at 819,830 to 820,273
SMc00800
SMc00801: SMc00801 - hypothetical protein, at 820,589 to 821,245
SMc00801
Position (kb)
819
820
821 Strain fitness (log2 ratio)
-1
0
1
2 at 819.159 kb on + strand at 819.160 kb on - strand at 819.162 kb on - strand at 819.216 kb on - strand, within SMc00799 at 819.216 kb on - strand, within SMc00799 at 819.572 kb on + strand, within SMc00799 at 819.573 kb on - strand, within SMc00799 at 819.573 kb on - strand, within SMc00799 at 819.674 kb on - strand at 819.763 kb on + strand at 819.763 kb on + strand at 819.764 kb on - strand at 819.764 kb on - strand at 819.764 kb on - strand at 819.831 kb on + strand at 819.971 kb on - strand, within SMc00800 at 820.007 kb on - strand, within SMc00800 at 820.278 kb on + strand at 820.278 kb on + strand at 820.278 kb on + strand at 820.278 kb on + strand at 820.279 kb on - strand at 820.279 kb on - strand at 820.279 kb on - strand at 820.279 kb on - strand at 820.279 kb on - strand at 820.279 kb on - strand at 820.279 kb on - strand at 820.323 kb on + strand at 820.323 kb on + strand at 820.323 kb on + strand at 820.323 kb on + strand at 820.323 kb on + strand at 820.323 kb on + strand at 820.324 kb on - strand at 820.324 kb on - strand at 820.363 kb on - strand at 820.375 kb on - strand at 820.375 kb on - strand at 820.375 kb on - strand at 820.641 kb on + strand at 820.641 kb on + strand at 820.642 kb on - strand at 820.642 kb on - strand at 820.658 kb on + strand, within SMc00801 at 820.737 kb on - strand, within SMc00801 at 820.737 kb on - strand, within SMc00801 at 820.739 kb on + strand, within SMc00801 at 820.750 kb on - strand, within SMc00801 at 820.785 kb on - strand, within SMc00801 at 820.854 kb on - strand, within SMc00801 at 820.872 kb on - strand, within SMc00801
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 819,159 + +0.6 819,160 - +0.1 819,162 - -0.2 819,216 - SMc00799 0.12 -0.5 819,216 - SMc00799 0.12 -0.2 819,572 + SMc00799 0.74 -0.0 819,573 - SMc00799 0.74 +0.1 819,573 - SMc00799 0.74 -0.6 819,674 - +0.9 819,763 + -0.6 819,763 + -0.2 819,764 - +1.0 819,764 - -0.1 819,764 - -1.6 819,831 + -0.4 819,971 - SMc00800 0.32 +0.9 820,007 - SMc00800 0.40 -0.0 820,278 + +0.0 820,278 + -0.3 820,278 + -0.3 820,278 + -0.3 820,279 - +0.4 820,279 - +0.1 820,279 - -0.1 820,279 - +0.2 820,279 - -1.0 820,279 - -0.2 820,279 - -0.0 820,323 + -0.2 820,323 + -0.4 820,323 + +0.2 820,323 + -0.2 820,323 + +2.4 820,323 + -0.7 820,324 - -0.1 820,324 - -0.8 820,363 - -0.6 820,375 - +0.5 820,375 - -0.8 820,375 - -0.8 820,641 + -0.2 820,641 + -0.1 820,642 - +0.3 820,642 - -0.2 820,658 + SMc00801 0.11 -0.4 820,737 - SMc00801 0.23 -1.7 820,737 - SMc00801 0.23 -0.6 820,739 + SMc00801 0.23 +0.5 820,750 - SMc00801 0.25 -0.7 820,785 - SMc00801 0.30 +1.6 820,854 - SMc00801 0.40 +0.3 820,872 - SMc00801 0.43 +0.4
Or see this region's nucleotide sequence