Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21261 and SM_b21262 are separated by 1 nucleotides SM_b21262 and SM_b21263 are separated by 80 nucleotides
SM_b21261: SM_b21261 - mureinpeptideoligopeptide ABC transporter substrate-binding protein precursor, at 832,991 to 834,892
_b21261
SM_b21262: SM_b21262 - mureinpeptideoligopeptide ABC transporter permease, at 834,894 to 835,892
_b21262
SM_b21263: SM_b21263 - mureinpeptideoligopeptide ABC transporter permease, at 835,973 to 837,064
_b21263
Position (kb) 834
835
836 Strain fitness (log2 ratio) -2
-1
0
1
2 at 833.928 kb on - strand, within SM_b21261 at 833.948 kb on + strand, within SM_b21261 at 833.948 kb on + strand, within SM_b21261 at 833.948 kb on + strand, within SM_b21261 at 833.949 kb on - strand, within SM_b21261 at 833.949 kb on - strand, within SM_b21261 at 833.950 kb on + strand, within SM_b21261 at 833.950 kb on + strand, within SM_b21261 at 833.950 kb on + strand, within SM_b21261 at 833.950 kb on + strand, within SM_b21261 at 833.950 kb on + strand, within SM_b21261 at 833.950 kb on + strand, within SM_b21261 at 833.951 kb on - strand, within SM_b21261 at 833.951 kb on - strand, within SM_b21261 at 833.951 kb on - strand, within SM_b21261 at 833.951 kb on - strand, within SM_b21261 at 833.951 kb on - strand, within SM_b21261 at 833.951 kb on - strand, within SM_b21261 at 833.951 kb on - strand, within SM_b21261 at 833.951 kb on - strand, within SM_b21261 at 833.951 kb on - strand, within SM_b21261 at 833.954 kb on + strand, within SM_b21261 at 833.954 kb on + strand, within SM_b21261 at 833.955 kb on - strand, within SM_b21261 at 834.147 kb on - strand, within SM_b21261 at 834.301 kb on + strand, within SM_b21261 at 834.392 kb on + strand, within SM_b21261 at 834.443 kb on - strand, within SM_b21261 at 834.474 kb on + strand, within SM_b21261 at 834.474 kb on + strand, within SM_b21261 at 834.590 kb on + strand, within SM_b21261 at 834.590 kb on + strand, within SM_b21261 at 834.590 kb on + strand, within SM_b21261 at 834.590 kb on + strand, within SM_b21261 at 834.590 kb on + strand, within SM_b21261 at 834.590 kb on + strand, within SM_b21261 at 834.590 kb on + strand, within SM_b21261 at 834.591 kb on - strand, within SM_b21261 at 834.591 kb on - strand, within SM_b21261 at 834.591 kb on - strand at 834.591 kb on - strand, within SM_b21261 at 834.591 kb on - strand, within SM_b21261 at 834.592 kb on + strand, within SM_b21261 at 834.592 kb on + strand, within SM_b21261 at 834.593 kb on - strand, within SM_b21261 at 834.657 kb on + strand, within SM_b21261 at 834.657 kb on + strand, within SM_b21261 at 834.725 kb on + strand at 834.725 kb on + strand at 834.725 kb on + strand at 834.726 kb on - strand at 834.726 kb on - strand at 834.821 kb on + strand at 834.821 kb on + strand at 834.821 kb on + strand at 834.854 kb on + strand at 834.903 kb on + strand at 834.904 kb on - strand at 835.005 kb on + strand, within SM_b21262 at 835.006 kb on - strand, within SM_b21262 at 835.006 kb on - strand, within SM_b21262 at 835.044 kb on - strand, within SM_b21262 at 835.074 kb on + strand, within SM_b21262 at 835.074 kb on + strand, within SM_b21262 at 835.075 kb on - strand, within SM_b21262 at 835.075 kb on - strand, within SM_b21262 at 835.075 kb on - strand, within SM_b21262 at 835.075 kb on - strand, within SM_b21262 at 835.105 kb on - strand, within SM_b21262 at 835.266 kb on + strand, within SM_b21262 at 835.266 kb on + strand, within SM_b21262 at 835.267 kb on - strand, within SM_b21262 at 835.267 kb on - strand, within SM_b21262 at 835.284 kb on + strand, within SM_b21262 at 835.299 kb on + strand, within SM_b21262 at 835.368 kb on + strand, within SM_b21262 at 835.368 kb on + strand, within SM_b21262 at 835.368 kb on + strand, within SM_b21262 at 835.368 kb on + strand, within SM_b21262 at 835.369 kb on - strand, within SM_b21262 at 835.369 kb on - strand, within SM_b21262 at 835.369 kb on - strand, within SM_b21262 at 835.422 kb on + strand, within SM_b21262 at 835.422 kb on + strand, within SM_b21262 at 835.423 kb on - strand, within SM_b21262 at 835.473 kb on - strand, within SM_b21262 at 835.473 kb on - strand, within SM_b21262 at 835.473 kb on - strand, within SM_b21262 at 835.508 kb on + strand, within SM_b21262 at 835.566 kb on + strand, within SM_b21262 at 835.566 kb on + strand, within SM_b21262 at 835.566 kb on + strand, within SM_b21262 at 835.770 kb on + strand, within SM_b21262 at 835.770 kb on + strand, within SM_b21262 at 835.770 kb on + strand, within SM_b21262 at 835.771 kb on - strand, within SM_b21262 at 835.771 kb on - strand, within SM_b21262 at 835.771 kb on - strand, within SM_b21262 at 835.771 kb on - strand, within SM_b21262 at 835.771 kb on - strand, within SM_b21262 at 835.771 kb on - strand, within SM_b21262 at 835.771 kb on - strand, within SM_b21262 at 835.932 kb on - strand at 835.958 kb on + strand at 836.085 kb on - strand, within SM_b21263 at 836.085 kb on - strand, within SM_b21263 at 836.120 kb on + strand, within SM_b21263 at 836.154 kb on - strand, within SM_b21263 at 836.154 kb on - strand, within SM_b21263 at 836.154 kb on - strand, within SM_b21263 at 836.269 kb on + strand, within SM_b21263 at 836.270 kb on - strand, within SM_b21263 at 836.645 kb on + strand, within SM_b21263 at 836.646 kb on - strand, within SM_b21263 at 836.656 kb on - strand, within SM_b21263 at 836.667 kb on + strand, within SM_b21263 at 836.738 kb on + strand, within SM_b21263 at 836.738 kb on + strand, within SM_b21263 at 836.738 kb on + strand, within SM_b21263
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 833,928 - SM_b21261 0.49 -0.6 833,948 + SM_b21261 0.50 -0.9 833,948 + SM_b21261 0.50 -0.8 833,948 + SM_b21261 0.50 +0.1 833,949 - SM_b21261 0.50 -1.2 833,949 - SM_b21261 0.50 +0.6 833,950 + SM_b21261 0.50 -0.3 833,950 + SM_b21261 0.50 -0.1 833,950 + SM_b21261 0.50 -0.7 833,950 + SM_b21261 0.50 -1.0 833,950 + SM_b21261 0.50 -0.2 833,950 + SM_b21261 0.50 -1.2 833,951 - SM_b21261 0.50 -0.2 833,951 - SM_b21261 0.50 -0.6 833,951 - SM_b21261 0.50 -0.7 833,951 - SM_b21261 0.50 -0.5 833,951 - SM_b21261 0.50 -0.5 833,951 - SM_b21261 0.50 -1.0 833,951 - SM_b21261 0.50 -1.5 833,951 - SM_b21261 0.50 -0.4 833,951 - SM_b21261 0.50 -0.2 833,954 + SM_b21261 0.51 -0.7 833,954 + SM_b21261 0.51 +0.1 833,955 - SM_b21261 0.51 -1.0 834,147 - SM_b21261 0.61 -0.7 834,301 + SM_b21261 0.69 -0.3 834,392 + SM_b21261 0.74 -1.1 834,443 - SM_b21261 0.76 -0.4 834,474 + SM_b21261 0.78 -0.0 834,474 + SM_b21261 0.78 -0.1 834,590 + SM_b21261 0.84 +0.0 834,590 + SM_b21261 0.84 -2.0 834,590 + SM_b21261 0.84 -0.7 834,590 + SM_b21261 0.84 -0.6 834,590 + SM_b21261 0.84 -1.1 834,590 + SM_b21261 0.84 -0.1 834,590 + SM_b21261 0.84 -0.5 834,591 - SM_b21261 0.84 -0.6 834,591 - SM_b21261 0.84 -1.3 834,591 - +0.8 834,591 - SM_b21261 0.84 -2.3 834,591 - SM_b21261 0.84 -0.6 834,592 + SM_b21261 0.84 -0.3 834,592 + SM_b21261 0.84 +0.0 834,593 - SM_b21261 0.84 +0.5 834,657 + SM_b21261 0.88 -0.5 834,657 + SM_b21261 0.88 -0.3 834,725 + -0.8 834,725 + -0.5 834,725 + -1.7 834,726 - -0.7 834,726 - -1.1 834,821 + +0.5 834,821 + -0.3 834,821 + -0.7 834,854 + -2.1 834,903 + -0.2 834,904 - +1.0 835,005 + SM_b21262 0.11 +0.3 835,006 - SM_b21262 0.11 +0.3 835,006 - SM_b21262 0.11 +0.0 835,044 - SM_b21262 0.15 +0.4 835,074 + SM_b21262 0.18 -0.6 835,074 + SM_b21262 0.18 +1.1 835,075 - SM_b21262 0.18 +0.4 835,075 - SM_b21262 0.18 +0.5 835,075 - SM_b21262 0.18 +0.4 835,075 - SM_b21262 0.18 +1.1 835,105 - SM_b21262 0.21 +0.2 835,266 + SM_b21262 0.37 +0.4 835,266 + SM_b21262 0.37 -0.5 835,267 - SM_b21262 0.37 +0.4 835,267 - SM_b21262 0.37 -1.3 835,284 + SM_b21262 0.39 +0.8 835,299 + SM_b21262 0.41 +0.2 835,368 + SM_b21262 0.47 +0.6 835,368 + SM_b21262 0.47 +0.0 835,368 + SM_b21262 0.47 +0.6 835,368 + SM_b21262 0.47 +0.1 835,369 - SM_b21262 0.48 -0.5 835,369 - SM_b21262 0.48 +0.4 835,369 - SM_b21262 0.48 +0.8 835,422 + SM_b21262 0.53 +0.6 835,422 + SM_b21262 0.53 +2.4 835,423 - SM_b21262 0.53 +0.1 835,473 - SM_b21262 0.58 +0.3 835,473 - SM_b21262 0.58 +0.4 835,473 - SM_b21262 0.58 -0.0 835,508 + SM_b21262 0.61 +0.8 835,566 + SM_b21262 0.67 +0.7 835,566 + SM_b21262 0.67 -0.0 835,566 + SM_b21262 0.67 +0.2 835,770 + SM_b21262 0.88 -0.8 835,770 + SM_b21262 0.88 -0.2 835,770 + SM_b21262 0.88 +0.5 835,771 - SM_b21262 0.88 +0.3 835,771 - SM_b21262 0.88 +0.2 835,771 - SM_b21262 0.88 +0.0 835,771 - SM_b21262 0.88 -0.0 835,771 - SM_b21262 0.88 +0.5 835,771 - SM_b21262 0.88 -0.6 835,771 - SM_b21262 0.88 -0.2 835,932 - +0.3 835,958 + +0.2 836,085 - SM_b21263 0.10 +1.7 836,085 - SM_b21263 0.10 -0.5 836,120 + SM_b21263 0.13 +0.6 836,154 - SM_b21263 0.17 +0.6 836,154 - SM_b21263 0.17 +0.7 836,154 - SM_b21263 0.17 +0.7 836,269 + SM_b21263 0.27 +0.4 836,270 - SM_b21263 0.27 +0.3 836,645 + SM_b21263 0.62 +0.5 836,646 - SM_b21263 0.62 -0.4 836,656 - SM_b21263 0.63 +0.5 836,667 + SM_b21263 0.64 +0.4 836,738 + SM_b21263 0.70 +0.0 836,738 + SM_b21263 0.70 +1.0 836,738 + SM_b21263 0.70 +0.2
Or see this region's nucleotide sequence