Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20082 and SM_b20083 are separated by 291 nucleotides SM_b20083 and SM_b20084 are separated by 111 nucleotides SM_b20084 and SM_b20085 are separated by 51 nucleotides SM_b20085 and SM_b20086 are separated by 197 nucleotides
SM_b20082: SM_b20082 - hypothetical protein, at 93,442 to 94,260
_b20082
SM_b20083: SM_b20083 - hypothetical protein, at 94,552 to 94,791
_b20083
SM_b20084: SM_b20084 - hypothetical protein, at 94,903 to 95,076
_b20084
SM_b20085: SM_b20085 - hypothetical protein, at 95,128 to 95,274
_b20085
SM_b20086: SM_b20086 - hypothetical protein, at 95,472 to 95,774
_b20086
Position (kb)
94
95 Strain fitness (log2 ratio)
-1
0
1 at 93.713 kb on + strand, within SM_b20082 at 93.713 kb on + strand, within SM_b20082 at 94.002 kb on - strand, within SM_b20082 at 94.379 kb on - strand at 94.447 kb on - strand at 94.551 kb on + strand at 94.551 kb on + strand at 94.551 kb on + strand at 94.551 kb on + strand at 94.552 kb on - strand at 94.552 kb on - strand at 94.552 kb on - strand at 94.714 kb on + strand, within SM_b20083 at 94.714 kb on + strand, within SM_b20083 at 94.714 kb on + strand, within SM_b20083 at 94.715 kb on - strand, within SM_b20083 at 94.829 kb on + strand at 94.830 kb on - strand at 94.856 kb on - strand at 94.904 kb on + strand at 94.904 kb on + strand at 94.957 kb on - strand, within SM_b20084 at 94.957 kb on - strand, within SM_b20084 at 94.957 kb on - strand, within SM_b20084 at 94.957 kb on - strand, within SM_b20084 at 94.970 kb on + strand, within SM_b20084 at 94.979 kb on - strand, within SM_b20084 at 95.036 kb on - strand, within SM_b20084 at 95.046 kb on + strand, within SM_b20084 at 95.046 kb on + strand, within SM_b20084 at 95.046 kb on + strand, within SM_b20084 at 95.058 kb on + strand, within SM_b20084 at 95.076 kb on + strand at 95.077 kb on - strand at 95.260 kb on + strand at 95.268 kb on + strand at 95.269 kb on - strand at 95.694 kb on - strand, within SM_b20086 at 95.694 kb on - strand, within SM_b20086 at 95.716 kb on - strand, within SM_b20086 at 95.762 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 93,713 + SM_b20082 0.33 -0.3 93,713 + SM_b20082 0.33 +0.1 94,002 - SM_b20082 0.68 -0.4 94,379 - -0.4 94,447 - -0.1 94,551 + +0.2 94,551 + +0.3 94,551 + -0.3 94,551 + +0.2 94,552 - -0.0 94,552 - -0.1 94,552 - -0.2 94,714 + SM_b20083 0.68 +0.6 94,714 + SM_b20083 0.68 +0.5 94,714 + SM_b20083 0.68 +0.1 94,715 - SM_b20083 0.68 +0.8 94,829 + -0.3 94,830 - +0.5 94,856 - +0.2 94,904 + -0.2 94,904 + +0.6 94,957 - SM_b20084 0.31 +0.2 94,957 - SM_b20084 0.31 -0.4 94,957 - SM_b20084 0.31 -0.7 94,957 - SM_b20084 0.31 -0.3 94,970 + SM_b20084 0.39 -0.4 94,979 - SM_b20084 0.44 -0.1 95,036 - SM_b20084 0.76 -0.1 95,046 + SM_b20084 0.82 -0.9 95,046 + SM_b20084 0.82 -1.0 95,046 + SM_b20084 0.82 +0.6 95,058 + SM_b20084 0.89 -0.7 95,076 + -0.6 95,077 - +0.1 95,260 + -0.2 95,268 + +0.4 95,269 - +0.8 95,694 - SM_b20086 0.73 -0.3 95,694 - SM_b20086 0.73 -1.3 95,716 - SM_b20086 0.81 +0.0 95,762 - -0.6
Or see this region's nucleotide sequence