Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20025 and SM_b20026 are separated by 206 nucleotides SM_b20026 and SM_b20027 are separated by 12 nucleotides
SM_b20025: SM_b20025 - hypothetical protein, at 36,147 to 37,124
_b20025
SM_b20026: SM_b20026 - hypothetical protein, at 37,331 to 37,792
_b20026
SM_b20027: SM_b20027 - hypothetical protein, at 37,805 to 39,310
_b20027
Position (kb) 37
38 Strain fitness (log2 ratio) -1
0
1
2 at 36.405 kb on + strand, within SM_b20025 at 36.406 kb on - strand, within SM_b20025 at 36.492 kb on + strand, within SM_b20025 at 36.493 kb on - strand, within SM_b20025 at 36.693 kb on + strand, within SM_b20025 at 36.694 kb on - strand, within SM_b20025 at 36.694 kb on - strand, within SM_b20025 at 36.804 kb on + strand, within SM_b20025 at 36.906 kb on + strand, within SM_b20025 at 36.907 kb on - strand, within SM_b20025 at 36.907 kb on - strand, within SM_b20025 at 37.113 kb on + strand at 37.742 kb on + strand, within SM_b20026 at 37.742 kb on + strand, within SM_b20026 at 37.791 kb on - strand at 37.791 kb on - strand at 37.791 kb on - strand at 37.884 kb on + strand at 37.885 kb on - strand at 38.006 kb on + strand, within SM_b20027 at 38.006 kb on + strand, within SM_b20027 at 38.006 kb on + strand, within SM_b20027 at 38.006 kb on + strand, within SM_b20027 at 38.007 kb on - strand, within SM_b20027 at 38.007 kb on - strand, within SM_b20027 at 38.010 kb on - strand, within SM_b20027 at 38.010 kb on - strand, within SM_b20027 at 38.053 kb on + strand, within SM_b20027 at 38.053 kb on + strand, within SM_b20027 at 38.053 kb on + strand, within SM_b20027 at 38.054 kb on - strand, within SM_b20027 at 38.244 kb on - strand, within SM_b20027 at 38.360 kb on - strand, within SM_b20027 at 38.360 kb on - strand, within SM_b20027 at 38.363 kb on + strand, within SM_b20027 at 38.363 kb on + strand, within SM_b20027 at 38.364 kb on - strand, within SM_b20027 at 38.403 kb on - strand, within SM_b20027 at 38.598 kb on + strand, within SM_b20027 at 38.599 kb on - strand, within SM_b20027 at 38.640 kb on - strand, within SM_b20027
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 36,405 + SM_b20025 0.26 +0.1 36,406 - SM_b20025 0.26 +0.6 36,492 + SM_b20025 0.35 +0.3 36,493 - SM_b20025 0.35 -0.6 36,693 + SM_b20025 0.56 -0.2 36,694 - SM_b20025 0.56 +0.5 36,694 - SM_b20025 0.56 -0.1 36,804 + SM_b20025 0.67 +0.0 36,906 + SM_b20025 0.78 -0.3 36,907 - SM_b20025 0.78 +0.6 36,907 - SM_b20025 0.78 -0.1 37,113 + -0.4 37,742 + SM_b20026 0.89 +2.0 37,742 + SM_b20026 0.89 +0.7 37,791 - +0.6 37,791 - +0.4 37,791 - +0.8 37,884 + -0.3 37,885 - -0.2 38,006 + SM_b20027 0.13 +0.8 38,006 + SM_b20027 0.13 -1.3 38,006 + SM_b20027 0.13 +0.0 38,006 + SM_b20027 0.13 -1.1 38,007 - SM_b20027 0.13 -0.8 38,007 - SM_b20027 0.13 -0.1 38,010 - SM_b20027 0.14 +0.4 38,010 - SM_b20027 0.14 +2.0 38,053 + SM_b20027 0.16 -0.4 38,053 + SM_b20027 0.16 -0.2 38,053 + SM_b20027 0.16 +0.3 38,054 - SM_b20027 0.17 -0.3 38,244 - SM_b20027 0.29 -0.8 38,360 - SM_b20027 0.37 +0.0 38,360 - SM_b20027 0.37 -0.3 38,363 + SM_b20027 0.37 +0.3 38,363 + SM_b20027 0.37 -0.3 38,364 - SM_b20027 0.37 -0.2 38,403 - SM_b20027 0.40 +0.6 38,598 + SM_b20027 0.53 +0.0 38,599 - SM_b20027 0.53 +0.0 38,640 - SM_b20027 0.55 +0.1
Or see this region's nucleotide sequence