Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4632 and Pf6N2E2_4633 are separated by 590 nucleotides Pf6N2E2_4633 and Pf6N2E2_4634 overlap by 1 nucleotides Pf6N2E2_4634 and Pf6N2E2_4635 are separated by 240 nucleotides
Pf6N2E2_4632 - Amine oxidase [flavin-containing] (EC 1.4.3.4), at 5,360,953 to 5,362,716
_4632
Pf6N2E2_4633 - Cytochrome B561, at 5,363,307 to 5,363,858
_4633
Pf6N2E2_4634 - Protein yceI precursor, at 5,363,858 to 5,364,487
_4634
Pf6N2E2_4635 - ATP-dependent RNA helicase RhlE, at 5,364,728 to 5,366,596
_4635
Position (kb) 5363
5364 Strain fitness (log2 ratio) -1
0
1
2 at 5362.715 kb on - strand at 5362.750 kb on - strand at 5362.750 kb on - strand at 5362.750 kb on - strand at 5362.750 kb on - strand at 5362.750 kb on - strand at 5362.764 kb on - strand at 5362.931 kb on - strand at 5362.931 kb on - strand at 5362.962 kb on + strand at 5362.963 kb on - strand at 5362.963 kb on - strand at 5362.982 kb on + strand at 5362.983 kb on - strand at 5362.983 kb on - strand at 5362.983 kb on - strand at 5362.983 kb on - strand at 5362.984 kb on + strand at 5362.985 kb on - strand at 5362.985 kb on - strand at 5362.997 kb on + strand at 5362.998 kb on - strand at 5362.998 kb on - strand at 5363.017 kb on + strand at 5363.017 kb on + strand at 5363.017 kb on + strand at 5363.017 kb on + strand at 5363.017 kb on + strand at 5363.018 kb on - strand at 5363.018 kb on - strand at 5363.018 kb on - strand at 5363.021 kb on - strand at 5363.037 kb on + strand at 5363.038 kb on - strand at 5363.038 kb on - strand at 5363.038 kb on - strand at 5363.038 kb on - strand at 5363.038 kb on - strand at 5363.069 kb on + strand at 5363.069 kb on + strand at 5363.070 kb on - strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.139 kb on + strand at 5363.139 kb on + strand at 5363.140 kb on - strand at 5363.179 kb on + strand at 5363.180 kb on - strand at 5363.180 kb on - strand at 5363.180 kb on - strand at 5363.218 kb on + strand at 5363.218 kb on + strand at 5363.265 kb on + strand at 5363.265 kb on + strand at 5363.266 kb on - strand at 5363.266 kb on - strand at 5363.299 kb on + strand at 5363.299 kb on + strand at 5363.299 kb on + strand at 5363.300 kb on - strand at 5363.314 kb on + strand at 5363.314 kb on + strand at 5363.315 kb on - strand at 5363.315 kb on - strand at 5363.315 kb on - strand at 5363.349 kb on - strand at 5363.382 kb on + strand, within Pf6N2E2_4633 at 5363.382 kb on + strand, within Pf6N2E2_4633 at 5363.383 kb on - strand, within Pf6N2E2_4633 at 5363.424 kb on + strand, within Pf6N2E2_4633 at 5363.424 kb on + strand, within Pf6N2E2_4633 at 5363.425 kb on - strand, within Pf6N2E2_4633 at 5363.425 kb on - strand, within Pf6N2E2_4633 at 5363.427 kb on + strand, within Pf6N2E2_4633 at 5363.427 kb on + strand, within Pf6N2E2_4633 at 5363.427 kb on + strand, within Pf6N2E2_4633 at 5363.427 kb on + strand, within Pf6N2E2_4633 at 5363.428 kb on - strand, within Pf6N2E2_4633 at 5363.428 kb on - strand, within Pf6N2E2_4633 at 5363.550 kb on + strand, within Pf6N2E2_4633 at 5363.551 kb on - strand, within Pf6N2E2_4633 at 5363.588 kb on + strand, within Pf6N2E2_4633 at 5363.589 kb on - strand, within Pf6N2E2_4633 at 5363.589 kb on - strand, within Pf6N2E2_4633 at 5363.589 kb on - strand, within Pf6N2E2_4633 at 5363.598 kb on + strand, within Pf6N2E2_4633 at 5363.598 kb on + strand, within Pf6N2E2_4633 at 5363.599 kb on - strand, within Pf6N2E2_4633 at 5363.745 kb on + strand, within Pf6N2E2_4633 at 5363.745 kb on + strand, within Pf6N2E2_4633 at 5363.745 kb on + strand, within Pf6N2E2_4633 at 5363.745 kb on + strand, within Pf6N2E2_4633 at 5363.745 kb on + strand, within Pf6N2E2_4633 at 5363.746 kb on - strand, within Pf6N2E2_4633 at 5363.746 kb on - strand, within Pf6N2E2_4633 at 5363.765 kb on + strand, within Pf6N2E2_4633 at 5363.766 kb on - strand, within Pf6N2E2_4633 at 5363.883 kb on + strand at 5363.966 kb on + strand, within Pf6N2E2_4634 at 5363.966 kb on + strand, within Pf6N2E2_4634 at 5363.967 kb on - strand, within Pf6N2E2_4634 at 5363.967 kb on - strand, within Pf6N2E2_4634 at 5364.027 kb on - strand, within Pf6N2E2_4634 at 5364.027 kb on - strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.043 kb on + strand, within Pf6N2E2_4634 at 5364.044 kb on - strand, within Pf6N2E2_4634 at 5364.044 kb on - strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.118 kb on - strand, within Pf6N2E2_4634 at 5364.118 kb on - strand, within Pf6N2E2_4634 at 5364.118 kb on - strand, within Pf6N2E2_4634 at 5364.118 kb on - strand, within Pf6N2E2_4634 at 5364.121 kb on + strand, within Pf6N2E2_4634 at 5364.122 kb on - strand, within Pf6N2E2_4634 at 5364.198 kb on - strand, within Pf6N2E2_4634 at 5364.242 kb on - strand, within Pf6N2E2_4634 at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.456 kb on - strand at 5364.456 kb on - strand at 5364.456 kb on - strand at 5364.456 kb on - strand at 5364.456 kb on - strand at 5364.456 kb on - strand at 5364.456 kb on - strand at 5364.485 kb on + strand at 5364.485 kb on + strand at 5364.485 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.625 kb on - strand at 5364.625 kb on - strand at 5364.625 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 5,362,715 - -0.9 5,362,750 - +0.0 5,362,750 - -1.1 5,362,750 - +0.5 5,362,750 - -0.3 5,362,750 - -0.1 5,362,764 - -0.1 5,362,931 - +0.3 5,362,931 - +0.7 5,362,962 + +0.4 5,362,963 - +0.1 5,362,963 - +0.7 5,362,982 + +1.1 5,362,983 - +0.3 5,362,983 - -0.5 5,362,983 - +0.6 5,362,983 - +0.2 5,362,984 + +0.2 5,362,985 - +1.1 5,362,985 - -0.0 5,362,997 + -0.2 5,362,998 - -0.0 5,362,998 - +0.0 5,363,017 + +0.7 5,363,017 + +1.5 5,363,017 + -0.3 5,363,017 + -0.9 5,363,017 + +0.2 5,363,018 - +0.3 5,363,018 - +0.7 5,363,018 - -0.8 5,363,021 - +0.7 5,363,037 + -0.5 5,363,038 - +1.1 5,363,038 - +0.4 5,363,038 - +0.1 5,363,038 - +0.5 5,363,038 - +0.4 5,363,069 + +0.2 5,363,069 + +1.4 5,363,070 - +0.5 5,363,072 + +0.1 5,363,072 + -0.1 5,363,072 + +0.2 5,363,072 + +1.0 5,363,072 + +0.9 5,363,072 + +0.7 5,363,072 + +0.5 5,363,072 + +0.4 5,363,072 + +0.2 5,363,073 - +0.5 5,363,073 - -0.2 5,363,073 - +0.2 5,363,073 - +0.4 5,363,073 - -0.0 5,363,073 - +0.1 5,363,073 - -0.0 5,363,073 - -0.1 5,363,073 - +0.2 5,363,073 - -0.6 5,363,073 - -0.4 5,363,073 - -0.8 5,363,073 - -0.7 5,363,073 - +0.5 5,363,073 - -0.4 5,363,073 - +2.2 5,363,139 + -0.7 5,363,139 + +1.2 5,363,140 - +0.9 5,363,179 + +0.5 5,363,180 - +0.1 5,363,180 - +0.2 5,363,180 - +0.5 5,363,218 + +0.4 5,363,218 + -0.9 5,363,265 + +0.2 5,363,265 + -0.5 5,363,266 - +0.6 5,363,266 - +0.1 5,363,299 + +0.2 5,363,299 + +0.2 5,363,299 + -0.2 5,363,300 - +1.0 5,363,314 + +0.2 5,363,314 + -1.5 5,363,315 - -0.7 5,363,315 - +0.3 5,363,315 - +1.0 5,363,349 - +0.2 5,363,382 + Pf6N2E2_4633 0.14 +1.1 5,363,382 + Pf6N2E2_4633 0.14 +0.7 5,363,383 - Pf6N2E2_4633 0.14 +0.2 5,363,424 + Pf6N2E2_4633 0.21 +0.9 5,363,424 + Pf6N2E2_4633 0.21 -0.4 5,363,425 - Pf6N2E2_4633 0.21 +0.5 5,363,425 - Pf6N2E2_4633 0.21 +1.4 5,363,427 + Pf6N2E2_4633 0.22 -0.1 5,363,427 + Pf6N2E2_4633 0.22 -0.7 5,363,427 + Pf6N2E2_4633 0.22 +0.1 5,363,427 + Pf6N2E2_4633 0.22 +0.7 5,363,428 - Pf6N2E2_4633 0.22 -0.7 5,363,428 - Pf6N2E2_4633 0.22 -0.2 5,363,550 + Pf6N2E2_4633 0.44 -0.4 5,363,551 - Pf6N2E2_4633 0.44 -0.3 5,363,588 + Pf6N2E2_4633 0.51 +0.9 5,363,589 - Pf6N2E2_4633 0.51 +0.2 5,363,589 - Pf6N2E2_4633 0.51 +0.5 5,363,589 - Pf6N2E2_4633 0.51 +0.2 5,363,598 + Pf6N2E2_4633 0.53 +0.2 5,363,598 + Pf6N2E2_4633 0.53 -0.5 5,363,599 - Pf6N2E2_4633 0.53 -0.8 5,363,745 + Pf6N2E2_4633 0.79 -0.2 5,363,745 + Pf6N2E2_4633 0.79 -0.2 5,363,745 + Pf6N2E2_4633 0.79 +0.8 5,363,745 + Pf6N2E2_4633 0.79 -0.1 5,363,745 + Pf6N2E2_4633 0.79 +0.2 5,363,746 - Pf6N2E2_4633 0.80 -1.0 5,363,746 - Pf6N2E2_4633 0.80 -0.6 5,363,765 + Pf6N2E2_4633 0.83 +0.1 5,363,766 - Pf6N2E2_4633 0.83 -0.2 5,363,883 + +0.8 5,363,966 + Pf6N2E2_4634 0.17 +0.6 5,363,966 + Pf6N2E2_4634 0.17 +0.1 5,363,967 - Pf6N2E2_4634 0.17 +0.4 5,363,967 - Pf6N2E2_4634 0.17 +0.2 5,364,027 - Pf6N2E2_4634 0.27 +0.8 5,364,027 - Pf6N2E2_4634 0.27 +1.2 5,364,028 + Pf6N2E2_4634 0.27 +0.2 5,364,028 + Pf6N2E2_4634 0.27 -1.7 5,364,028 + Pf6N2E2_4634 0.27 -0.3 5,364,028 + Pf6N2E2_4634 0.27 +0.6 5,364,028 + Pf6N2E2_4634 0.27 -0.1 5,364,028 + Pf6N2E2_4634 0.27 +0.4 5,364,028 + Pf6N2E2_4634 0.27 +0.8 5,364,028 + Pf6N2E2_4634 0.27 -0.1 5,364,028 + Pf6N2E2_4634 0.27 +0.6 5,364,028 + Pf6N2E2_4634 0.27 +0.5 5,364,028 + Pf6N2E2_4634 0.27 -1.0 5,364,028 + Pf6N2E2_4634 0.27 -0.5 5,364,029 - Pf6N2E2_4634 0.27 -0.3 5,364,029 - Pf6N2E2_4634 0.27 +1.1 5,364,029 - Pf6N2E2_4634 0.27 +0.2 5,364,029 - Pf6N2E2_4634 0.27 +0.9 5,364,029 - Pf6N2E2_4634 0.27 +0.0 5,364,029 - Pf6N2E2_4634 0.27 +0.9 5,364,029 - Pf6N2E2_4634 0.27 +0.1 5,364,032 + Pf6N2E2_4634 0.28 +0.0 5,364,032 + Pf6N2E2_4634 0.28 -0.2 5,364,032 + Pf6N2E2_4634 0.28 -1.0 5,364,032 + Pf6N2E2_4634 0.28 +0.2 5,364,032 + Pf6N2E2_4634 0.28 -0.2 5,364,032 + Pf6N2E2_4634 0.28 -0.4 5,364,032 + Pf6N2E2_4634 0.28 +1.5 5,364,032 + Pf6N2E2_4634 0.28 +0.6 5,364,032 + Pf6N2E2_4634 0.28 +0.0 5,364,032 + Pf6N2E2_4634 0.28 +1.0 5,364,032 + Pf6N2E2_4634 0.28 +0.5 5,364,032 + Pf6N2E2_4634 0.28 +0.3 5,364,032 + Pf6N2E2_4634 0.28 -0.0 5,364,032 + Pf6N2E2_4634 0.28 +0.6 5,364,033 - Pf6N2E2_4634 0.28 +0.6 5,364,033 - Pf6N2E2_4634 0.28 -0.4 5,364,033 - Pf6N2E2_4634 0.28 -0.9 5,364,033 - Pf6N2E2_4634 0.28 -0.0 5,364,033 - Pf6N2E2_4634 0.28 -0.6 5,364,033 - Pf6N2E2_4634 0.28 +0.3 5,364,033 - Pf6N2E2_4634 0.28 +0.6 5,364,033 - Pf6N2E2_4634 0.28 +0.3 5,364,033 - Pf6N2E2_4634 0.28 +1.0 5,364,033 - Pf6N2E2_4634 0.28 +1.1 5,364,033 - Pf6N2E2_4634 0.28 +1.3 5,364,043 + Pf6N2E2_4634 0.29 +0.1 5,364,044 - Pf6N2E2_4634 0.30 -0.3 5,364,044 - Pf6N2E2_4634 0.30 +0.2 5,364,117 + Pf6N2E2_4634 0.41 -0.2 5,364,117 + Pf6N2E2_4634 0.41 -0.0 5,364,117 + Pf6N2E2_4634 0.41 +0.8 5,364,117 + Pf6N2E2_4634 0.41 -0.4 5,364,117 + Pf6N2E2_4634 0.41 +0.4 5,364,117 + Pf6N2E2_4634 0.41 +0.2 5,364,117 + +2.2 5,364,117 + Pf6N2E2_4634 0.41 +1.0 5,364,117 + Pf6N2E2_4634 0.41 +0.3 5,364,117 + Pf6N2E2_4634 0.41 -0.2 5,364,117 + Pf6N2E2_4634 0.41 +0.8 5,364,117 + Pf6N2E2_4634 0.41 +0.6 5,364,118 - Pf6N2E2_4634 0.41 +0.5 5,364,118 - Pf6N2E2_4634 0.41 +0.2 5,364,118 - Pf6N2E2_4634 0.41 -0.1 5,364,118 - Pf6N2E2_4634 0.41 -0.4 5,364,121 + Pf6N2E2_4634 0.42 +0.1 5,364,122 - Pf6N2E2_4634 0.42 -0.4 5,364,198 - Pf6N2E2_4634 0.54 -0.7 5,364,242 - Pf6N2E2_4634 0.61 +0.0 5,364,455 + +0.3 5,364,455 + +0.2 5,364,455 + +0.2 5,364,455 + -0.2 5,364,455 + +0.4 5,364,455 + -0.0 5,364,455 + -0.0 5,364,455 + -0.7 5,364,455 + -0.6 5,364,455 + +0.6 5,364,455 + +0.1 5,364,455 + -0.6 5,364,455 + +0.2 5,364,456 - +0.7 5,364,456 - +1.0 5,364,456 - +0.3 5,364,456 - +0.5 5,364,456 - +0.8 5,364,456 - +0.9 5,364,456 - +0.5 5,364,485 + +0.6 5,364,485 + -0.7 5,364,485 + +0.5 5,364,624 + +0.6 5,364,624 + +0.5 5,364,624 + -0.7 5,364,624 + -0.3 5,364,624 + +0.4 5,364,624 + +0.2 5,364,624 + +0.3 5,364,624 + +0.4 5,364,624 + +0.1 5,364,625 - +0.9 5,364,625 - -0.6 5,364,625 - -0.2
Or see this region's nucleotide sequence