Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS31450

Experiment: Temperature shift 10_to_25; with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Temperature shift 10_to_25; with MOPS
1,640,965	+		PFLU_RS07375	0.25	-1.9
1,640,965	+		PFLU_RS07375	0.25	+2.6
1,640,965	+		PFLU_RS07375	0.25	-0.0
1,640,965	+		PFLU_RS07375	0.25	+0.1
1,640,965	+		PFLU_RS07375	0.25	-3.0
1,640,965	+		PFLU_RS07375	0.25	-1.0
1,640,965	+		PFLU_RS07375	0.25	+1.0
1,640,965	+		PFLU_RS07375	0.25	+1.9
1,640,965	+		PFLU_RS07375	0.25	+2.7
1,640,966	-		PFLU_RS07375	0.25	-1.1
1,640,966	-		PFLU_RS07375	0.25	+1.8
1,640,966	-		PFLU_RS07375	0.25	+2.4
1,640,966	-		PFLU_RS07375	0.25	+1.0
1,640,966	-		PFLU_RS07375	0.25	-1.7
1,640,966	-		PFLU_RS07375	0.25	+2.0
1,640,966	-		PFLU_RS07375	0.25	-1.8
1,640,966	-		PFLU_RS07375	0.25	-2.2
1,640,966	-		PFLU_RS07375	0.25	+1.5
1,640,966	-		PFLU_RS07375	0.25	-2.1
1,640,966	-		PFLU_RS07375	0.25	+0.1
1,641,025	+		PFLU_RS07375	0.30	+0.3
1,641,025	+		PFLU_RS07375	0.30	+0.9
1,641,026	-		PFLU_RS07375	0.30	+1.7
1,641,034	+		PFLU_RS07375	0.30	-2.1
1,641,388	+		PFLU_RS07375	0.57	-0.7
1,641,389	-		PFLU_RS07375	0.57	-0.3
1,641,408	+		PFLU_RS07375	0.59	+0.7
1,641,408	+		PFLU_RS07375	0.59	-0.0
1,641,408	+		PFLU_RS07375	0.59	-1.6
1,641,408	+		PFLU_RS07375	0.59	+1.3
1,641,408	+		PFLU_RS07375	0.59	-0.5
1,641,409	-		PFLU_RS07375	0.59	-1.2
1,641,409	-		PFLU_RS07375	0.59	-2.6
1,641,409	-		PFLU_RS07375	0.59	-2.1
1,641,409	-		PFLU_RS07375	0.59	+1.1
1,641,409	-		PFLU_RS07375	0.59	-1.5
1,641,412	+		PFLU_RS07375	0.59	+0.1
1,641,412	+		PFLU_RS07375	0.59	-1.0
1,641,412	+		PFLU_RS07375	0.59	-0.2
1,641,412	+		PFLU_RS07375	0.59	+0.8
1,641,412	+		PFLU_RS07375	0.59	-0.7
1,641,412	+		PFLU_RS07375	0.59	-2.0
1,641,412	+		PFLU_RS07375	0.59	+0.6
1,641,412	+		PFLU_RS07375	0.59	-1.6
1,641,412	+		PFLU_RS07375	0.59	+2.0
1,641,413	-		PFLU_RS07375	0.59	-0.6
1,641,413	-		PFLU_RS07375	0.59	+1.0
1,641,413	-		PFLU_RS07375	0.59	-1.6
1,641,413	-		PFLU_RS07375	0.59	+0.4
1,641,413	-		PFLU_RS07375	0.59	-1.0
1,641,413	-		PFLU_RS07375	0.59	+2.0
1,641,413	-		PFLU_RS07375	0.59	-1.0
1,641,413	-		PFLU_RS07375	0.59	+0.9
1,641,413	-		PFLU_RS07375	0.59	-0.3
1,641,413	-		PFLU_RS07375	0.59	+1.3
1,641,413	-		PFLU_RS07375	0.59	+2.9
1,641,413	-		PFLU_RS07375	0.59	-3.6
1,641,451	+		PFLU_RS07375	0.62	-2.8
1,641,452	-		PFLU_RS07375	0.62	+0.8
1,641,725	+		PFLU_RS07375	0.82	-1.6
1,641,726	-		PFLU_RS07375	0.83	+1.6
1,641,955	+				-0.0
1,641,956	-				-1.2
1,641,956	-				-0.1
1,641,956	-				+0.3
1,641,978	+		PFLU_RS31450	0.27	-0.0
1,641,978	+		PFLU_RS31450	0.27	-1.9
1,641,979	-		PFLU_RS31450	0.27	-2.0
1,642,069	-		PFLU_RS31450	0.64	+0.9
1,642,069	-		PFLU_RS31450	0.64	-2.4
1,642,121	+		PFLU_RS31450	0.85	-0.7
1,642,121	+		PFLU_RS31450	0.85	+0.7
1,642,121	+		PFLU_RS31450	0.85	+1.8
1,642,121	+		PFLU_RS31450	0.85	-0.0
1,642,121	+		PFLU_RS31450	0.85	+1.4
1,642,121	+		PFLU_RS31450	0.85	-1.0
1,642,121	+		PFLU_RS31450	0.85	-3.2
1,642,121	+		PFLU_RS31450	0.85	-0.8
1,642,121	+		PFLU_RS31450	0.85	+1.6
1,642,121	+		PFLU_RS31450	0.85	+1.1
1,642,122	-		PFLU_RS31450	0.85	+0.2
1,642,122	-		PFLU_RS31450	0.85	+0.4
1,642,122	-		PFLU_RS31450	0.85	-2.4
1,642,122	-		PFLU_RS31450	0.85	-0.8
1,642,122	-		PFLU_RS31450	0.85	-0.6
1,642,122	-		PFLU_RS31450	0.85	+0.7
1,642,122	-		PFLU_RS31450	0.85	-1.6
1,642,122	-		PFLU_RS31450	0.85	-0.7
1,642,122	-		PFLU_RS31450	0.85	+1.5
1,642,123	+		PFLU_RS31450	0.86	+0.6
1,642,123	+		PFLU_RS31450	0.86	+0.2
1,642,124	-		PFLU_RS31450	0.86	+0.7
1,642,124	-		PFLU_RS31450	0.86	-1.9
1,642,124	-		PFLU_RS31450	0.86	-1.0
1,642,157	+				-0.4
1,642,158	-				-2.4
1,642,180	+				+2.3
1,642,181	-				+2.5
1,642,181	-				+1.9
1,642,181	-				-1.6
1,642,234	+				+0.3
1,642,234	+				+1.1
1,642,234	+				-1.4
1,642,234	+				-0.3
1,642,234	+				-0.8
1,642,234	+				-0.0
1,642,235	-				+2.1
1,642,235	-				-2.2
1,642,235	-				+0.6
1,642,235	-				+0.6
1,642,235	-				-0.5
1,642,235	-				-2.0
1,642,629	+		PFLU_RS07380	0.44	+0.7
1,642,629	+		PFLU_RS07380	0.44	+0.9
1,642,629	+		PFLU_RS07380	0.44	-0.5
1,642,630	-		PFLU_RS07380	0.45	-2.0
1,642,630	-		PFLU_RS07380	0.45	+1.4
1,642,630	-		PFLU_RS07380	0.45	-0.5
1,642,788	+		PFLU_RS07380	0.62	+0.2
1,642,789	-		PFLU_RS07380	0.62	-0.2
1,642,789	-		PFLU_RS07380	0.62	-0.4
1,642,789	-		PFLU_RS07380	0.62	-2.2
1,642,902	+		PFLU_RS07380	0.74	-0.0
1,642,903	-		PFLU_RS07380	0.74	+0.3
1,642,903	-		PFLU_RS07380	0.74	+1.7
1,642,903	-		PFLU_RS07380	0.74	-1.6
1,642,903	-		PFLU_RS07380	0.74	-3.4
1,642,959	+		PFLU_RS07380	0.80	-2.2
1,642,959	+		PFLU_RS07380	0.80	-0.2
1,643,108	+				-1.1
1,643,108	+				+0.1
1,643,109	-				+1.6
1,643,109	-				+0.3
1,643,151	+				-0.5
1,643,151	+				-0.0
1,643,151	+				+0.6
1,643,151	+				+1.0
1,643,151	+				+0.6
1,643,151	+				+0.5
1,643,151	+				+1.1
1,643,151	+				+2.3
1,643,151	+				+0.9
1,643,151	+				-2.9
1,643,151	+				+0.8
1,643,151	+				+0.4
1,643,151	+				+0.9
1,643,151	+				+0.3
1,643,151	+				+1.7
1,643,151	+				+1.8
1,643,151	+				-1.4
1,643,151	+				+0.2
1,643,151	+				+0.5
1,643,152	-				-0.6
1,643,152	-				-2.6
1,643,152	-				-0.0
1,643,152	-				-2.1
1,643,152	-				+0.1
1,643,152	-				-2.1
1,643,152	-				+1.5
1,643,152	-				+1.5
1,643,152	-				-2.0
1,643,152	-				-0.2
1,643,152	-				+1.1
1,643,152	-				-0.4
1,643,153	+				+2.0
1,643,153	+				+0.5
1,643,153	+				-2.7
1,643,153	+				-1.1
1,643,153	+				+1.4
1,643,153	+				+1.6
1,643,153	+				-1.0
1,643,153	+				-3.0
1,643,153	+				-0.7
1,643,153	+				+0.6
1,643,153	+				+1.9
1,643,153	+				-1.4
1,643,153	+				-2.9
1,643,153	+				-1.4
1,643,153	+				-0.2
1,643,153	+				+1.9
1,643,153	+				+1.4
1,643,153	+				+0.4
1,643,153	+				+0.4
1,643,153	+				-2.5
1,643,153	+				-3.3
1,643,153	+				-0.3
1,643,153	+				+0.1
1,643,154	-				-2.2
1,643,154	-				-1.0
1,643,154	-				+0.4
1,643,154	-				-2.7
1,643,154	-				-3.2
1,643,154	-				-1.2
1,643,154	-				+3.4
1,643,154	-				-1.1
1,643,154	-				-2.8
1,643,154	-				+0.7
1,643,154	-				-0.0
1,643,154	-				-3.0
1,643,154	-				+1.2
1,643,154	-				-2.1
1,643,154	-				-2.7
1,643,154	-				-0.5
1,643,154	-				+3.5
1,643,154	-				+0.6
1,643,154	-				+3.0
1,643,154	-				+1.6
1,643,154	-				+0.9
1,643,154	-				+0.8
1,643,154	-				-0.3
1,643,154	-				+0.9
1,643,154	-				-1.2
1,643,154	-				+0.7
1,643,154	-				-0.4
1,643,154	-				-0.1
1,643,154	-				+0.3
1,643,154	-				+1.6
1,643,154	-				-1.9
1,643,154	-				+1.4
1,643,154	-				-0.4
1,643,154	-				-1.4
1,643,157	+				+3.1
1,643,157	+				+0.4
1,643,157	+				-2.6
1,643,157	+				-0.0
1,643,157	+				-2.2
1,643,157	+				+0.6
1,643,157	+				+1.6
1,643,157	+				+0.3
1,643,157	+				+0.6
1,643,157	+				-0.7
1,643,157	+				-2.5
1,643,157	+				-0.3
1,643,157	+				+2.4
1,643,157	+				-2.7
1,643,157	+				+1.0
1,643,157	+				+1.4
1,643,157	+				-0.7
1,643,157	+				-3.1
1,643,157	+				-0.4
1,643,157	+				+1.4
1,643,157	+				-0.7
1,643,157	+				-1.1
1,643,157	+				+1.6
1,643,157	+				-0.4
1,643,157	+				+2.0