Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12700

Experiment: Temperature shift 10_to_25; with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Temperature shift 10_to_25; with MOPS
2,870,074	-		PFLU_RS12695	0.65	+1.9
2,870,179	-		PFLU_RS12695	0.69	+1.2
2,870,179	-		PFLU_RS12695	0.69	-1.1
2,870,205	+		PFLU_RS12695	0.70	-1.1
2,870,214	+		PFLU_RS12695	0.71	+1.5
2,870,290	-		PFLU_RS12695	0.74	-1.6
2,870,307	+		PFLU_RS12695	0.74	+3.6
2,870,333	+		PFLU_RS12695	0.75	-0.1
2,870,345	+		PFLU_RS12695	0.76	-0.2
2,870,345	+		PFLU_RS12695	0.76	-0.4
2,870,345	+		PFLU_RS12695	0.76	-1.6
2,870,345	+		PFLU_RS12695	0.76	-2.5
2,870,508	+		PFLU_RS12695	0.82	+0.8
2,870,508	+		PFLU_RS12695	0.82	+1.3
2,870,508	+		PFLU_RS12695	0.82	+0.9
2,870,508	+		PFLU_RS12695	0.82	-0.6
2,870,508	+		PFLU_RS12695	0.82	-0.1
2,870,509	-		PFLU_RS12695	0.82	+0.8
2,870,509	-		PFLU_RS12695	0.82	+1.3
2,870,509	-		PFLU_RS12695	0.82	+1.1
2,870,514	+		PFLU_RS12695	0.83	+1.4
2,870,515	-		PFLU_RS12695	0.83	+0.3
2,870,515	-		PFLU_RS12695	0.83	+4.3
2,870,515	-		PFLU_RS12695	0.83	+0.3
2,870,582	-		PFLU_RS12695	0.85	+1.4
2,870,616	+		PFLU_RS12695	0.87	+2.5
2,870,616	+		PFLU_RS12695	0.87	-0.9
2,870,617	-		PFLU_RS12695	0.87	-0.1
2,870,617	-		PFLU_RS12695	0.87	+0.6
2,870,655	+		PFLU_RS12695	0.88	-2.2
2,870,655	+		PFLU_RS12695	0.88	+0.9
2,870,656	-		PFLU_RS12695	0.88	+0.9
2,870,656	-		PFLU_RS12695	0.88	+1.1
2,870,656	-		PFLU_RS12695	0.88	+1.6
2,870,709	+				+0.7
2,870,710	-				-2.5
2,870,710	-				-1.4
2,870,760	+				-2.6
2,870,760	+				+0.6
2,870,761	-				-1.6
2,870,761	-				+0.3
2,870,761	-				+1.4
2,870,763	-				+0.6
2,870,763	-				+0.5
2,870,787	+				+1.9
2,870,787	+				+2.5
2,870,788	-				+0.1
2,870,858	+				-2.4
2,870,859	-				-1.1
2,870,865	+				+0.2
2,870,865	+				-1.9
2,870,865	+				-0.4
2,870,866	-				+0.8
2,870,866	-				+1.9
2,870,866	-				-0.1
2,870,866	-				+0.4
2,870,866	-				-3.6
2,870,880	+				+1.1
2,870,880	+				-2.2
2,870,880	+				+0.6
2,870,880	+				+0.9
2,870,880	+				+1.5
2,870,881	-				-1.4
2,870,881	-				+1.1
2,870,881	-				+0.1
2,870,881	-				-0.4
2,870,881	-				-2.2
2,870,902	-				+2.6
2,870,937	+				+0.6
2,870,938	-				+0.2
2,870,938	-				+0.8
2,870,938	-				-0.4
2,870,938	-				+0.4
2,870,938	-				-2.2
2,870,961	-				+0.6
2,870,961	-				-0.1
2,870,971	-				-0.4
2,870,971	-				-1.1
2,870,984	+				+1.5
2,870,985	-				-1.7
2,871,130	+		PFLU_RS12700	0.27	+0.9
2,871,130	+		PFLU_RS12700	0.27	-0.9
2,871,130	+		PFLU_RS12700	0.27	+0.1
2,871,130	+		PFLU_RS12700	0.27	+1.9
2,871,130	+		PFLU_RS12700	0.27	+1.5
2,871,130	+		PFLU_RS12700	0.27	+1.9
2,871,130	+		PFLU_RS12700	0.27	+0.7
2,871,130	+		PFLU_RS12700	0.27	+1.5
2,871,130	+		PFLU_RS12700	0.27	-1.9
2,871,130	+		PFLU_RS12700	0.27	+0.9
2,871,130	+		PFLU_RS12700	0.27	-1.1
2,871,130	+		PFLU_RS12700	0.27	+0.3
2,871,130	+		PFLU_RS12700	0.27	+0.9
2,871,130	+		PFLU_RS12700	0.27	-2.2
2,871,130	+		PFLU_RS12700	0.27	+1.8
2,871,130	+		PFLU_RS12700	0.27	+0.7
2,871,130	+		PFLU_RS12700	0.27	-1.1
2,871,130	+		PFLU_RS12700	0.27	-1.1
2,871,130	+		PFLU_RS12700	0.27	+2.5
2,871,130	+		PFLU_RS12700	0.27	+1.0
2,871,130	+		PFLU_RS12700	0.27	+0.7
2,871,130	+		PFLU_RS12700	0.27	-2.1
2,871,130	+		PFLU_RS12700	0.27	+2.8
2,871,130	+		PFLU_RS12700	0.27	+0.4
2,871,130	+		PFLU_RS12700	0.27	-2.2
2,871,130	+		PFLU_RS12700	0.27	-0.3
2,871,130	+		PFLU_RS12700	0.27	+0.1
2,871,131	-		PFLU_RS12700	0.28	-0.6
2,871,131	-		PFLU_RS12700	0.28	-1.1
2,871,131	-		PFLU_RS12700	0.28	+0.2
2,871,131	-		PFLU_RS12700	0.28	-1.0
2,871,131	-		PFLU_RS12700	0.28	-0.5
2,871,131	-		PFLU_RS12700	0.28	+1.8
2,871,131	-		PFLU_RS12700	0.28	+1.5
2,871,131	-		PFLU_RS12700	0.28	+0.7
2,871,131	-		PFLU_RS12700	0.28	-1.6
2,871,131	-		PFLU_RS12700	0.28	+0.9
2,871,131	-		PFLU_RS12700	0.28	-3.3
2,871,131	-		PFLU_RS12700	0.28	+2.8
2,871,131	-		PFLU_RS12700	0.28	-1.6
2,871,131	-		PFLU_RS12700	0.28	-0.6
2,871,131	-		PFLU_RS12700	0.28	-0.2
2,871,131	-		PFLU_RS12700	0.28	+0.9
2,871,131	-		PFLU_RS12700	0.28	+2.0
2,871,131	-		PFLU_RS12700	0.28	-3.4
2,871,131	-		PFLU_RS12700	0.28	+1.2
2,871,131	-		PFLU_RS12700	0.28	+0.9
2,871,131	-		PFLU_RS12700	0.28	-0.1
2,871,131	-		PFLU_RS12700	0.28	+0.6
2,871,131	-		PFLU_RS12700	0.28	+2.5
2,871,199	+		PFLU_RS12700	0.48	-0.6
2,871,200	-		PFLU_RS12700	0.48	+1.4
2,871,283	+		PFLU_RS12700	0.74	+0.1
2,871,284	-		PFLU_RS12700	0.74	-1.9
2,871,284	-		PFLU_RS12700	0.74	-0.1
2,871,331	+		PFLU_RS12700	0.88	-0.1
2,871,331	+		PFLU_RS12700	0.88	-1.6
2,871,331	+		PFLU_RS12700	0.88	+0.7
2,871,332	-		PFLU_RS12700	0.88	+0.6
2,871,332	-		PFLU_RS12700	0.88	-2.4
2,871,349	+				-0.5
2,871,350	-				-1.4
2,871,351	+				+2.0
2,871,351	+				-2.8
2,871,351	+				+1.1
2,871,352	-				+1.2
2,871,363	+				-1.1
2,871,363	+				-1.1
2,871,363	+				-1.4
2,871,363	+				+0.7
2,871,363	+				+1.9
2,871,364	-				+1.0
2,871,364	-				+1.7
2,871,375	+				-1.2
2,871,376	-				-3.4
2,871,411	+				+0.6
2,871,430	+				-1.8
2,871,456	+				-2.1
2,871,456	+				+3.6
2,871,456	+				-2.1
2,871,457	-				-1.4
2,871,457	-				+1.1
2,871,555	-		PFLU_RS12705	0.20	-1.3
2,871,611	-		PFLU_RS12705	0.26	+0.5
2,871,972	+		PFLU_RS12705	0.66	-0.5
2,871,972	+		PFLU_RS12705	0.66	-0.1
2,871,972	+		PFLU_RS12705	0.66	+0.7
2,871,972	+		PFLU_RS12705	0.66	-2.2
2,871,972	+		PFLU_RS12705	0.66	-0.6
2,871,972	+		PFLU_RS12705	0.66	-1.6
2,871,972	+		PFLU_RS12705	0.66	+0.7
2,871,972	+		PFLU_RS12705	0.66	+3.0
2,871,972	+		PFLU_RS12705	0.66	-3.1
2,871,972	+		PFLU_RS12705	0.66	-2.6
2,871,972	+		PFLU_RS12705	0.66	-2.5
2,871,972	+		PFLU_RS12705	0.66	+0.8
2,871,973	-		PFLU_RS12705	0.67	-1.6
2,871,973	-		PFLU_RS12705	0.67	+0.4
2,871,973	-		PFLU_RS12705	0.67	-1.6
2,871,973	-		PFLU_RS12705	0.67	+0.5
2,871,973	-		PFLU_RS12705	0.67	+2.4
2,871,973	-		PFLU_RS12705	0.67	-3.1
2,871,973	-		PFLU_RS12705	0.67	-2.1
2,871,973	-		PFLU_RS12705	0.67	+1.6
2,872,139	+		PFLU_RS12705	0.85	+0.9
2,872,251	+				-0.5
2,872,252	-				-0.1
2,872,274	-				-2.2
2,872,342	+				+2.7
2,872,342	+				-1.9
2,872,342	+				-2.8
2,872,342	+				-2.8
2,872,342	+				+1.9
2,872,342	+				-0.4
2,872,342	+				-1.5
2,872,342	+				-0.1
2,872,342	+				-0.5
2,872,342	+				-2.5
2,872,342	+				+0.0
2,872,342	+				+1.3
2,872,342	+				-1.9
2,872,343	-				+0.0
2,872,343	-				-1.6
2,872,343	-				-3.3
2,872,343	-				-0.6
2,872,343	-				+0.7
2,872,343	-				-0.1
2,872,343	-				-2.6
2,872,344	+				-1.4
2,872,344	+				+1.1
2,872,345	-				-1.1
2,872,345	-				-0.6