Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21480 and HSERO_RS21485 are separated by 13 nucleotides HSERO_RS21485 and HSERO_RS21490 are separated by 79 nucleotides HSERO_RS21490 and HSERO_RS21495 are separated by 96 nucleotides
HSERO_RS21480: HSERO_RS21480 - transcriptional regulator, at 4,917,586 to 4,918,167
_RS21480
HSERO_RS21485: HSERO_RS21485 - phosphoglycolate phosphatase, at 4,918,181 to 4,918,918
_RS21485
HSERO_RS21490: HSERO_RS21490 - hypothetical protein, at 4,918,998 to 4,919,909
_RS21490
HSERO_RS21495: HSERO_RS21495 - acetylglutamate kinase, at 4,920,006 to 4,920,899
_RS21495
Position (kb) 4918
4919
4920 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4918.093 kb on + strand, within HSERO_RS21480 at 4918.185 kb on - strand at 4918.230 kb on + strand at 4918.318 kb on + strand, within HSERO_RS21485 at 4918.362 kb on + strand, within HSERO_RS21485 at 4918.510 kb on + strand, within HSERO_RS21485 at 4918.543 kb on + strand, within HSERO_RS21485 at 4918.543 kb on - strand, within HSERO_RS21485 at 4918.671 kb on + strand, within HSERO_RS21485 at 4918.718 kb on - strand, within HSERO_RS21485 at 4918.791 kb on + strand, within HSERO_RS21485 at 4918.818 kb on - strand, within HSERO_RS21485 at 4918.908 kb on - strand at 4919.417 kb on + strand, within HSERO_RS21490 at 4919.425 kb on - strand, within HSERO_RS21490 at 4919.585 kb on + strand, within HSERO_RS21490 at 4919.630 kb on - strand, within HSERO_RS21490 at 4919.709 kb on + strand, within HSERO_RS21490 at 4919.712 kb on + strand, within HSERO_RS21490 at 4919.815 kb on - strand, within HSERO_RS21490 at 4919.927 kb on + strand at 4919.935 kb on - strand at 4920.002 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 4,918,093 + HSERO_RS21480 0.87 +1.3 4,918,185 - -0.8 4,918,230 + +0.0 4,918,318 + HSERO_RS21485 0.19 +1.1 4,918,362 + HSERO_RS21485 0.25 +0.6 4,918,510 + HSERO_RS21485 0.45 -1.3 4,918,543 + HSERO_RS21485 0.49 -0.2 4,918,543 - HSERO_RS21485 0.49 +0.6 4,918,671 + HSERO_RS21485 0.66 -0.4 4,918,718 - HSERO_RS21485 0.73 -0.0 4,918,791 + HSERO_RS21485 0.83 -0.4 4,918,818 - HSERO_RS21485 0.86 -0.7 4,918,908 - -0.8 4,919,417 + HSERO_RS21490 0.46 -0.1 4,919,425 - HSERO_RS21490 0.47 +0.9 4,919,585 + HSERO_RS21490 0.64 +1.6 4,919,630 - HSERO_RS21490 0.69 -0.4 4,919,709 + HSERO_RS21490 0.78 +0.5 4,919,712 + HSERO_RS21490 0.78 -0.9 4,919,815 - HSERO_RS21490 0.90 +0.1 4,919,927 + -3.4 4,919,935 - -0.0 4,920,002 - -0.4
Or see this region's nucleotide sequence