Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_03524 and CCNA_03525 are separated by 9 nucleotides CCNA_03525 and CCNA_03526 overlap by 54 nucleotides CCNA_03526 and CCNA_03527 are separated by 18 nucleotides
CCNA_03524: CCNA_03524 - di-/tripeptide transporter, at 3,681,121 to 3,683,001
_03524
CCNA_03525: CCNA_03525 - hypothetical protein, at 3,683,011 to 3,683,352
_03525
CCNA_03526: CCNA_03526 - hypothetical protein, at 3,683,299 to 3,683,442
_03526
CCNA_03527: CCNA_03527 - glutamate-cysteine ligase family 2, at 3,683,461 to 3,684,822
_03527
Position (kb)
3683
3684 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3682.301 kb on - strand, within CCNA_03524 at 3682.328 kb on + strand, within CCNA_03524 at 3682.457 kb on - strand at 3682.460 kb on + strand, within CCNA_03524 at 3682.465 kb on + strand, within CCNA_03524 at 3682.465 kb on + strand, within CCNA_03524 at 3682.468 kb on - strand, within CCNA_03524 at 3682.547 kb on - strand, within CCNA_03524 at 3682.548 kb on - strand, within CCNA_03524 at 3682.579 kb on + strand, within CCNA_03524 at 3682.579 kb on + strand, within CCNA_03524 at 3682.627 kb on + strand, within CCNA_03524 at 3682.636 kb on - strand, within CCNA_03524 at 3682.733 kb on - strand, within CCNA_03524 at 3682.771 kb on - strand, within CCNA_03524 at 3682.794 kb on + strand, within CCNA_03524 at 3682.851 kb on - strand at 3682.915 kb on + strand at 3682.969 kb on + strand at 3683.098 kb on + strand, within CCNA_03525 at 3683.106 kb on - strand, within CCNA_03525 at 3683.166 kb on - strand, within CCNA_03525 at 3683.194 kb on - strand, within CCNA_03525 at 3683.209 kb on + strand, within CCNA_03525 at 3683.214 kb on + strand, within CCNA_03525 at 3683.214 kb on + strand, within CCNA_03525 at 3683.222 kb on - strand, within CCNA_03525 at 3683.237 kb on + strand, within CCNA_03525 at 3683.245 kb on - strand, within CCNA_03525 at 3683.245 kb on - strand, within CCNA_03525 at 3683.258 kb on + strand, within CCNA_03525 at 3683.302 kb on + strand at 3683.405 kb on + strand, within CCNA_03526 at 3683.410 kb on + strand, within CCNA_03526 at 3683.413 kb on - strand, within CCNA_03526 at 3683.413 kb on - strand, within CCNA_03526 at 3683.415 kb on + strand, within CCNA_03526 at 3683.458 kb on + strand at 3683.477 kb on + strand at 3683.477 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 3,682,301 - CCNA_03524 0.63 +2.9 3,682,328 + CCNA_03524 0.64 +1.5 3,682,457 - +4.1 3,682,460 + CCNA_03524 0.71 +1.0 3,682,465 + CCNA_03524 0.71 +0.7 3,682,465 + CCNA_03524 0.71 +2.4 3,682,468 - CCNA_03524 0.72 +1.6 3,682,547 - CCNA_03524 0.76 +2.1 3,682,548 - CCNA_03524 0.76 +2.4 3,682,579 + CCNA_03524 0.78 +1.7 3,682,579 + CCNA_03524 0.78 +1.8 3,682,627 + CCNA_03524 0.80 +0.4 3,682,636 - CCNA_03524 0.81 +1.6 3,682,733 - CCNA_03524 0.86 +3.0 3,682,771 - CCNA_03524 0.88 +0.6 3,682,794 + CCNA_03524 0.89 +1.3 3,682,851 - +2.4 3,682,915 + +1.6 3,682,969 + +2.1 3,683,098 + CCNA_03525 0.25 +1.6 3,683,106 - CCNA_03525 0.28 -1.9 3,683,166 - CCNA_03525 0.45 +0.0 3,683,194 - CCNA_03525 0.54 +0.1 3,683,209 + CCNA_03525 0.58 -0.9 3,683,214 + CCNA_03525 0.59 -0.4 3,683,214 + CCNA_03525 0.59 -1.0 3,683,222 - CCNA_03525 0.62 +0.1 3,683,237 + CCNA_03525 0.66 -0.4 3,683,245 - CCNA_03525 0.68 -0.1 3,683,245 - CCNA_03525 0.68 +0.1 3,683,258 + CCNA_03525 0.72 +0.1 3,683,302 + -2.1 3,683,405 + CCNA_03526 0.74 -0.6 3,683,410 + CCNA_03526 0.77 -1.4 3,683,413 - CCNA_03526 0.79 -3.4 3,683,413 - CCNA_03526 0.79 -1.7 3,683,415 + CCNA_03526 0.81 -0.8 3,683,458 + -2.3 3,683,477 + +0.6 3,683,477 + -0.9
Or see this region's nucleotide sequence