Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS25220

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
6,137,108	+				+0.2
6,137,135	-				+1.6
6,137,148	+				-0.1
6,137,148	+				-0.2
6,137,197	+				-0.1
6,137,198	-				-2.0
6,137,229	+				+0.1
6,137,230	-				-0.1
6,137,230	-				+0.1
6,137,230	-				-1.0
6,137,509	-		CA265_RS25215	0.41	-0.4
6,137,561	-		CA265_RS25215	0.47	-1.4
6,137,561	-		CA265_RS25215	0.47	-1.6
6,137,610	+		CA265_RS25215	0.54	-0.5
6,137,706	+		CA265_RS25215	0.66	-2.2
6,137,706	+		CA265_RS25215	0.66	-0.3
6,137,707	-		CA265_RS25215	0.66	-1.3
6,137,715	+		CA265_RS25215	0.67	-0.7
6,137,723	+		CA265_RS25215	0.68	-1.8
6,137,886	+		CA265_RS25215	0.89	-1.7
6,137,932	+				+0.1
6,137,933	-				-0.1
6,137,933	-				-0.6
6,137,937	-				-1.2
6,137,986	-				+0.7
6,137,994	-				+0.5
6,138,011	+				+0.8
6,138,054	+				-0.8
6,138,120	-				+0.8
6,138,156	-				-0.2
6,138,161	-				-0.7
6,138,275	+		CA265_RS25220	0.15	-0.1
6,138,275	+		CA265_RS25220	0.15	-0.7
6,138,291	-		CA265_RS25220	0.16	-0.2
6,138,314	+		CA265_RS25220	0.18	+1.5
6,138,324	+		CA265_RS25220	0.19	-0.1
6,138,486	-		CA265_RS25220	0.31	+1.4
6,138,519	+		CA265_RS25220	0.33	+0.0
6,138,520	-		CA265_RS25220	0.34	+0.2
6,138,520	-		CA265_RS25220	0.34	+1.1
6,138,543	+		CA265_RS25220	0.35	-0.4
6,138,581	+		CA265_RS25220	0.38	+1.0
6,138,584	+		CA265_RS25220	0.38	+0.4
6,138,597	+		CA265_RS25220	0.39	-0.8
6,138,597	+		CA265_RS25220	0.39	+0.1
6,138,598	-		CA265_RS25220	0.39	-0.2
6,138,611	+		CA265_RS25220	0.40	+0.4
6,138,615	-		CA265_RS25220	0.41	+0.9
6,138,631	-		CA265_RS25220	0.42	-0.2
6,138,656	+		CA265_RS25220	0.44	-0.4
6,138,707	+		CA265_RS25220	0.48	-0.1
6,138,708	-		CA265_RS25220	0.48	-1.0
6,138,912	+		CA265_RS25220	0.63	-0.4
6,138,912	+		CA265_RS25220	0.63	-0.1
6,138,913	-		CA265_RS25220	0.63	-0.1
6,138,978	-		CA265_RS25220	0.68	+0.2
6,138,978	-		CA265_RS25220	0.68	-0.4
6,138,979	+		CA265_RS25220	0.68	+2.0
6,138,980	-		CA265_RS25220	0.68	-0.2
6,138,984	+		CA265_RS25220	0.69	-0.5
6,139,010	+		CA265_RS25220	0.71	-2.0
6,139,110	-		CA265_RS25220	0.78	+0.1
6,139,157	+		CA265_RS25220	0.82	+0.4
6,139,170	+		CA265_RS25220	0.83	-0.0
6,139,172	+		CA265_RS25220	0.83	+0.2
6,139,173	-		CA265_RS25220	0.83	+2.8
6,139,194	+		CA265_RS25220	0.84	+0.1
6,139,195	-		CA265_RS25220	0.84	-0.1
6,139,202	+		CA265_RS25220	0.85	-0.8
6,139,315	+				+1.1
6,139,321	+				+0.3
6,139,371	+				+0.6
6,139,381	-				+0.4
6,139,405	+				+0.6
6,139,478	+				+1.0
6,139,482	+				+0.4
6,139,500	+				+1.2
6,139,500	+				+1.5