Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS23145

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
5,660,197	-		CA265_RS23135	0.56	+0.8
5,660,197	-		CA265_RS23135	0.56	-1.3
5,660,197	-		CA265_RS23135	0.56	+1.1
5,660,201	-		CA265_RS23135	0.57	-0.0
5,660,284	+		CA265_RS23135	0.66	-1.1
5,660,285	-		CA265_RS23135	0.66	-0.3
5,660,285	-		CA265_RS23135	0.66	-0.7
5,660,285	-		CA265_RS23135	0.66	-0.8
5,660,325	+		CA265_RS23135	0.70	+0.1
5,660,372	+		CA265_RS23135	0.76	-0.6
5,660,495	+		CA265_RS23135	0.89	-1.0
5,660,495	+		CA265_RS23135	0.89	+0.2
5,660,495	+		CA265_RS23135	0.89	-0.4
5,660,496	-		CA265_RS23135	0.89	-1.1
5,660,496	-		CA265_RS23135	0.89	-0.4
5,660,496	-		CA265_RS23135	0.89	-0.2
5,660,497	+		CA265_RS23135	0.89	-0.2
5,660,497	+		CA265_RS23135	0.89	-1.0
5,660,497	+		CA265_RS23135	0.89	-0.1
5,660,510	+				+0.6
5,660,516	+				+0.4
5,660,517	-				+0.2
5,660,561	+				+0.4
5,660,583	+				+0.1
5,660,584	-				-0.3
5,660,594	-				-1.1
5,660,615	+				-0.1
5,660,615	+				-0.3
5,660,661	+		CA265_RS23140	0.24	+0.1
5,660,662	-		CA265_RS23140	0.25	+0.7
5,660,705	+		CA265_RS23140	0.41	+0.0
5,660,706	-		CA265_RS23140	0.42	-0.3
5,660,724	+		CA265_RS23140	0.49	+0.6
5,660,731	-		CA265_RS23140	0.52	+0.4
5,660,830	-				+1.0
5,660,914	+				-0.6
5,660,916	+				+0.4
5,661,021	+				+0.1
5,661,046	-				+2.4
5,661,067	+				+0.0
5,661,147	-				+1.7
5,661,154	-				+1.9
5,661,238	-				+1.9
5,661,283	-		CA265_RS23145	0.11	+1.3
5,661,289	-		CA265_RS23145	0.12	-0.1
5,661,417	-		CA265_RS23145	0.25	+2.5
5,661,652	-		CA265_RS23145	0.49	+0.5
5,661,707	-		CA265_RS23145	0.54	+0.9
5,661,916	-		CA265_RS23145	0.76	+1.0
5,662,093	-				+0.5
5,662,098	-				-0.6
5,662,126	-				-0.3
5,662,126	-				+0.4
5,662,149	-				+1.3
5,662,213	+				+0.7
5,662,260	-				-0.7
5,662,260	-				+0.5
5,662,261	+				+2.6
5,662,261	+				+0.1
5,662,262	-				+0.1
5,662,289	+		CA265_RS23150	0.12	+0.2
5,662,292	-		CA265_RS23150	0.12	+0.3
5,662,364	-		CA265_RS23150	0.22	+0.0
5,662,415	-		CA265_RS23150	0.29	+0.3
5,662,426	+		CA265_RS23150	0.30	+1.6
5,662,427	-		CA265_RS23150	0.30	-1.1
5,662,427	-		CA265_RS23150	0.30	+0.6
5,662,429	-		CA265_RS23150	0.31	-0.5
5,662,429	-		CA265_RS23150	0.31	-0.3
5,662,431	+		CA265_RS23150	0.31	+0.3
5,662,431	+		CA265_RS23150	0.31	+0.1
5,662,431	+		CA265_RS23150	0.31	-1.9
5,662,594	+		CA265_RS23150	0.53	-0.1
5,662,660	+		CA265_RS23150	0.61	-0.9
5,662,661	-		CA265_RS23150	0.62	+0.1
5,662,661	-		CA265_RS23150	0.62	+0.8
5,662,661	-		CA265_RS23150	0.62	-0.0
5,662,687	+		CA265_RS23150	0.65	-1.1
5,662,688	-		CA265_RS23150	0.65	-0.3
5,662,693	-		CA265_RS23150	0.66	+0.2
5,662,697	-		CA265_RS23150	0.66	-0.5
5,662,716	-		CA265_RS23150	0.69	+0.6
5,662,750	+		CA265_RS23150	0.73	-0.8
5,662,763	-		CA265_RS23150	0.75	-0.7
5,662,822	+		CA265_RS23150	0.83	-1.1
5,662,823	-		CA265_RS23150	0.83	+0.1
5,662,900	+				-1.1
5,662,958	-				-0.3
5,662,958	-				+0.1
5,662,958	-				+0.3
5,662,992	+				-0.6
5,663,016	-				+0.1
5,663,037	-				+1.6
5,663,037	-				+0.2
5,663,037	-				+0.5
5,663,043	+				+0.0
5,663,043	+				-0.7