Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15940

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
4,001,635	-				+0.7
4,001,635	-				+0.3
4,001,730	-				+0.1
4,001,730	-				-0.5
4,001,889	+		CA265_RS15935	0.16	-0.3
4,001,890	-		CA265_RS15935	0.17	+0.9
4,001,908	+		CA265_RS15935	0.20	-0.0
4,001,930	-		CA265_RS15935	0.24	+0.8
4,001,945	+		CA265_RS15935	0.27	-0.4
4,001,953	-		CA265_RS15935	0.29	-0.5
4,002,055	+		CA265_RS15935	0.49	-0.3
4,002,056	-		CA265_RS15935	0.49	-0.5
4,002,056	-		CA265_RS15935	0.49	+1.9
4,002,056	-		CA265_RS15935	0.49	-0.6
4,002,056	-		CA265_RS15935	0.49	-0.4
4,002,058	-		CA265_RS15935	0.49	+0.8
4,002,100	+		CA265_RS15935	0.57	+0.1
4,002,149	-		CA265_RS15935	0.67	-0.8
4,002,298	-				-0.4
4,002,302	-				-1.8
4,003,038	-				-1.4
4,003,056	-				-0.7
4,003,195	-		CA265_RS15945	0.19	+0.0
4,003,246	-		CA265_RS15945	0.25	-0.0
4,003,273	-		CA265_RS15945	0.28	-1.8
4,003,285	-		CA265_RS15945	0.29	-0.3
4,003,327	-		CA265_RS15945	0.34	-0.9
4,003,443	-		CA265_RS15945	0.47	-3.2
4,003,491	-		CA265_RS15945	0.53	-0.9
4,003,557	-		CA265_RS15945	0.61	-2.0
4,003,859	-				-1.4
4,003,913	+				-0.6
4,003,913	+				-0.6
4,003,990	+				-0.4