Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15910

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
3,996,796	-		CA265_RS15905	0.24	+0.2
3,996,806	+		CA265_RS15905	0.26	-0.0
3,996,810	+		CA265_RS15905	0.26	-0.2
3,996,810	+		CA265_RS15905	0.26	-0.2
3,996,810	+		CA265_RS15905	0.26	+0.8
3,996,811	-		CA265_RS15905	0.27	+0.1
3,996,811	-		CA265_RS15905	0.27	-0.4
3,996,811	-		CA265_RS15905	0.27	-0.2
3,996,811	-		CA265_RS15905	0.27	-0.3
3,996,811	-		CA265_RS15905	0.27	-0.7
3,996,852	-		CA265_RS15905	0.34	-0.4
3,996,879	-		CA265_RS15905	0.39	-1.6
3,996,916	-		CA265_RS15905	0.45	-0.3
3,996,927	-		CA265_RS15905	0.47	-0.0
3,996,927	-		CA265_RS15905	0.47	-0.1
3,997,029	+		CA265_RS15905	0.65	+1.1
3,997,240	-				-0.5
3,997,369	+				+0.6
3,997,501	-				-0.2
3,997,519	-				-0.9
3,997,621	+				+1.5
3,997,628	+				-0.1
3,997,673	+				+1.1
3,997,674	-				+1.3
3,997,674	-				+1.2
3,997,731	+				+0.4
3,997,771	+		CA265_RS15910	0.12	+0.1
3,997,840	+		CA265_RS15910	0.18	+0.3
3,997,840	+		CA265_RS15910	0.18	+0.6
3,997,840	+		CA265_RS15910	0.18	+0.2
3,997,841	-		CA265_RS15910	0.18	+0.7
3,997,841	-		CA265_RS15910	0.18	+0.3
3,997,864	+		CA265_RS15910	0.20	+0.7
3,997,896	+		CA265_RS15910	0.23	+0.4
3,997,907	+		CA265_RS15910	0.24	-0.6
3,997,951	+		CA265_RS15910	0.28	+0.4
3,998,024	-		CA265_RS15910	0.34	+0.5
3,998,031	+		CA265_RS15910	0.35	+0.4
3,998,031	+		CA265_RS15910	0.35	+0.3
3,998,043	+		CA265_RS15910	0.36	+0.6
3,998,077	-		CA265_RS15910	0.39	+0.2
3,998,092	-		CA265_RS15910	0.40	+0.3
3,998,122	+		CA265_RS15910	0.43	+0.2
3,998,170	-		CA265_RS15910	0.47	+0.7
3,998,256	-		CA265_RS15910	0.54	+0.4
3,998,287	+		CA265_RS15910	0.57	+0.5
3,998,288	-		CA265_RS15910	0.57	+0.2
3,998,378	+		CA265_RS15910	0.65	-0.1
3,998,378	+		CA265_RS15910	0.65	+0.2
3,998,433	+		CA265_RS15910	0.70	-1.1
3,998,438	+		CA265_RS15910	0.70	+0.6
3,998,538	-		CA265_RS15910	0.79	-0.2
3,998,571	-		CA265_RS15910	0.82	-0.1
3,998,571	-		CA265_RS15910	0.82	-0.1
3,998,577	+		CA265_RS15910	0.82	+0.9
3,998,577	+		CA265_RS15910	0.82	-0.3
3,998,601	+		CA265_RS15910	0.84	+0.1
3,998,602	-		CA265_RS15910	0.84	+0.8
3,998,752	+				+0.2
3,998,752	+				-0.1
3,998,772	+				+2.9
3,998,827	+				+0.2
3,998,828	-				-0.2
3,998,872	+				-0.3
3,998,873	-				+0.5
3,998,876	-				+0.1
3,998,930	-				+0.3
3,999,685	-		CA265_RS15920	0.21	-0.3
3,999,691	-		CA265_RS15920	0.22	+0.5
3,999,739	-		CA265_RS15920	0.28	-0.0