Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06320

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
1,550,603	-		CA265_RS06310	0.78	-0.1
1,550,671	+		CA265_RS06310	0.88	-1.3
1,550,671	+		CA265_RS06310	0.88	-2.1
1,550,672	-		CA265_RS06310	0.88	-0.6
1,550,697	-				+0.3
1,550,714	+				+0.8
1,550,766	+				-1.0
1,550,794	+				-0.5
1,550,822	+				+0.4
1,550,834	-				+0.5
1,550,840	-				-0.8
1,550,886	-				+0.5
1,550,894	+				+0.7
1,550,895	-				-0.2
1,550,895	-				+1.2
1,551,014	+		CA265_RS06315	0.20	+0.2
1,551,015	-		CA265_RS06315	0.20	+0.4
1,551,018	+		CA265_RS06315	0.20	+0.6
1,551,018	+		CA265_RS06315	0.20	+0.2
1,551,058	-		CA265_RS06315	0.26	-0.0
1,551,063	-		CA265_RS06315	0.27	-0.8
1,551,104	+		CA265_RS06315	0.33	+0.8
1,551,116	+		CA265_RS06315	0.35	-1.2
1,551,151	+		CA265_RS06315	0.41	-0.1
1,551,159	-		CA265_RS06315	0.42	+0.7
1,551,211	+		CA265_RS06315	0.50	+0.9
1,551,212	-		CA265_RS06315	0.50	+0.1
1,551,268	+		CA265_RS06315	0.59	-0.1
1,551,405	+		CA265_RS06315	0.80	+0.2
1,551,408	+		CA265_RS06315	0.81	+0.3
1,551,468	-				-0.8
1,551,468	-				-0.1
1,551,512	+				+0.6
1,551,547	+				+1.2
1,551,547	-				+0.4
1,551,547	-				-2.3
1,551,554	-				+0.5
1,551,606	+				+0.6
1,551,678	+				-0.2
1,551,705	+		CA265_RS06320	0.11	+0.9
1,551,705	+		CA265_RS06320	0.11	+0.4
1,551,718	+		CA265_RS06320	0.12	+1.0
1,551,719	-		CA265_RS06320	0.12	+0.5
1,551,821	-		CA265_RS06320	0.19	+0.2
1,551,861	+		CA265_RS06320	0.21	+0.7
1,552,048	+		CA265_RS06320	0.33	-0.4
1,552,162	-		CA265_RS06320	0.41	-0.0
1,552,165	-		CA265_RS06320	0.41	+1.1
1,552,357	+		CA265_RS06320	0.53	+0.6
1,552,357	+		CA265_RS06320	0.53	+0.5
1,552,358	-		CA265_RS06320	0.53	+0.4
1,552,360	+		CA265_RS06320	0.54	+0.2
1,552,384	-		CA265_RS06320	0.55	+1.2
1,552,515	+		CA265_RS06320	0.64	-0.3
1,552,516	-		CA265_RS06320	0.64	+1.5
1,552,516	-		CA265_RS06320	0.64	+0.1
1,552,548	+		CA265_RS06320	0.66	+1.1
1,552,699	+		CA265_RS06320	0.76	+0.2
1,552,702	-		CA265_RS06320	0.76	+0.2
1,552,756	-		CA265_RS06320	0.79	+0.3
1,552,835	-		CA265_RS06320	0.84	+0.4
1,552,839	+		CA265_RS06320	0.85	+0.7
1,552,905	+		CA265_RS06320	0.89	-0.5
1,552,907	+		CA265_RS06320	0.89	+0.9
1,552,928	+				+0.1
1,552,928	+				+0.4
1,553,048	-				+0.9
1,553,111	+				-0.0
1,553,112	-				-2.4
1,553,122	+				-1.3
1,553,186	+				+0.1
1,553,268	-				-2.3
1,553,337	+				-0.6
1,553,345	-				-1.5
1,553,345	-				-1.7
1,553,374	+				+0.7
1,553,407	+		CA265_RS06325	0.10	-0.5
1,553,504	-		CA265_RS06325	0.30	-1.6
1,553,510	+		CA265_RS06325	0.32	-0.2
1,553,524	+		CA265_RS06325	0.35	-0.0
1,553,733	-		CA265_RS06325	0.78	-0.8
1,553,759	+		CA265_RS06325	0.84	+0.9
1,553,813	-				+0.5
1,553,867	+				+0.9
1,553,876	+				+0.5
1,553,876	+				-0.1
1,553,896	-				+0.1