Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS10985

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE51_RS10980 and ABIE51_RS10985 are separated by 11 nucleotidesABIE51_RS10985 and ABIE51_RS10990 are separated by 230 nucleotidesABIE51_RS10990 and ABIE51_RS10995 are separated by 96 nucleotides ABIE51_RS10980: ABIE51_RS10980 - AI-2E family transporter, at 2,385,191 to 2,386,231 _RS10980 ABIE51_RS10985: ABIE51_RS10985 - MipA/OmpV family protein, at 2,386,243 to 2,387,682 _RS10985 ABIE51_RS10990: ABIE51_RS10990 - glycine zipper 2TM domain-containing protein, at 2,387,913 to 2,388,371 _RS10990 ABIE51_RS10995: ABIE51_RS10995 - DUF6491 family protein, at 2,388,468 to 2,388,944 _RS10995 Position (kb) 2386 2387 2388Strain fitness (log2 ratio) -1 0 1at 2385.804 kb on + strand, within ABIE51_RS10980at 2385.804 kb on + strand, within ABIE51_RS10980at 2385.886 kb on - strand, within ABIE51_RS10980at 2385.925 kb on - strand, within ABIE51_RS10980at 2385.925 kb on - strand, within ABIE51_RS10980at 2386.274 kb on + strandat 2386.275 kb on - strandat 2386.355 kb on + strandat 2386.355 kb on + strandat 2386.478 kb on + strand, within ABIE51_RS10985at 2386.637 kb on + strand, within ABIE51_RS10985at 2386.637 kb on + strand, within ABIE51_RS10985at 2386.794 kb on - strand, within ABIE51_RS10985at 2386.982 kb on + strand, within ABIE51_RS10985at 2387.073 kb on - strand, within ABIE51_RS10985at 2387.073 kb on - strand, within ABIE51_RS10985at 2387.076 kb on - strand, within ABIE51_RS10985at 2387.078 kb on + strand, within ABIE51_RS10985at 2387.246 kb on + strand, within ABIE51_RS10985at 2387.247 kb on - strand, within ABIE51_RS10985at 2387.430 kb on - strand, within ABIE51_RS10985at 2387.436 kb on - strand, within ABIE51_RS10985at 2387.470 kb on + strand, within ABIE51_RS10985at 2387.470 kb on + strand, within ABIE51_RS10985at 2387.471 kb on - strand, within ABIE51_RS10985at 2387.471 kb on - strand, within ABIE51_RS10985at 2387.474 kb on + strand, within ABIE51_RS10985

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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2,385,804 + ABIE51_RS10980 0.59 +0.3
2,385,804 + ABIE51_RS10980 0.59 -0.1
2,385,886 - ABIE51_RS10980 0.67 +0.1
2,385,925 - ABIE51_RS10980 0.71 -0.4
2,385,925 - ABIE51_RS10980 0.71 -0.7
2,386,274 + +0.8
2,386,275 - +0.1
2,386,355 + +0.0
2,386,355 + -1.2
2,386,478 + ABIE51_RS10985 0.16 -0.1
2,386,637 + ABIE51_RS10985 0.27 +0.6
2,386,637 + ABIE51_RS10985 0.27 +0.1
2,386,794 - ABIE51_RS10985 0.38 +0.0
2,386,982 + ABIE51_RS10985 0.51 +0.2
2,387,073 - ABIE51_RS10985 0.58 +0.2
2,387,073 - ABIE51_RS10985 0.58 +0.1
2,387,076 - ABIE51_RS10985 0.58 +0.8
2,387,078 + ABIE51_RS10985 0.58 -0.3
2,387,246 + ABIE51_RS10985 0.70 -0.4
2,387,247 - ABIE51_RS10985 0.70 -0.2
2,387,430 - ABIE51_RS10985 0.82 +1.5
2,387,436 - ABIE51_RS10985 0.83 +1.0
2,387,470 + ABIE51_RS10985 0.85 -0.0
2,387,470 + ABIE51_RS10985 0.85 -0.4
2,387,471 - ABIE51_RS10985 0.85 +0.1
2,387,471 - ABIE51_RS10985 0.85 +0.2
2,387,474 + ABIE51_RS10985 0.85 -0.8

Or see this region's nucleotide sequence