Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS10980 and ABIE51_RS10985 are separated by 11 nucleotides ABIE51_RS10985 and ABIE51_RS10990 are separated by 230 nucleotides ABIE51_RS10990 and ABIE51_RS10995 are separated by 96 nucleotides
ABIE51_RS10980: ABIE51_RS10980 - AI-2E family transporter, at 2,385,191 to 2,386,231
_RS10980
ABIE51_RS10985: ABIE51_RS10985 - MipA/OmpV family protein, at 2,386,243 to 2,387,682
_RS10985
ABIE51_RS10990: ABIE51_RS10990 - glycine zipper 2TM domain-containing protein, at 2,387,913 to 2,388,371
_RS10990
ABIE51_RS10995: ABIE51_RS10995 - DUF6491 family protein, at 2,388,468 to 2,388,944
_RS10995
Position (kb)
2386
2387
2388 Strain fitness (log2 ratio)
-1
0
1 at 2385.804 kb on + strand, within ABIE51_RS10980 at 2385.804 kb on + strand, within ABIE51_RS10980 at 2385.886 kb on - strand, within ABIE51_RS10980 at 2385.925 kb on - strand, within ABIE51_RS10980 at 2385.925 kb on - strand, within ABIE51_RS10980 at 2386.274 kb on + strand at 2386.275 kb on - strand at 2386.355 kb on + strand at 2386.355 kb on + strand at 2386.478 kb on + strand, within ABIE51_RS10985 at 2386.637 kb on + strand, within ABIE51_RS10985 at 2386.637 kb on + strand, within ABIE51_RS10985 at 2386.794 kb on - strand, within ABIE51_RS10985 at 2386.982 kb on + strand, within ABIE51_RS10985 at 2387.073 kb on - strand, within ABIE51_RS10985 at 2387.073 kb on - strand, within ABIE51_RS10985 at 2387.076 kb on - strand, within ABIE51_RS10985 at 2387.078 kb on + strand, within ABIE51_RS10985 at 2387.246 kb on + strand, within ABIE51_RS10985 at 2387.247 kb on - strand, within ABIE51_RS10985 at 2387.430 kb on - strand, within ABIE51_RS10985 at 2387.436 kb on - strand, within ABIE51_RS10985 at 2387.470 kb on + strand, within ABIE51_RS10985 at 2387.470 kb on + strand, within ABIE51_RS10985 at 2387.471 kb on - strand, within ABIE51_RS10985 at 2387.471 kb on - strand, within ABIE51_RS10985 at 2387.474 kb on + strand, within ABIE51_RS10985
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 2,385,804 + ABIE51_RS10980 0.59 +0.3 2,385,804 + ABIE51_RS10980 0.59 -0.1 2,385,886 - ABIE51_RS10980 0.67 +0.1 2,385,925 - ABIE51_RS10980 0.71 -0.4 2,385,925 - ABIE51_RS10980 0.71 -0.7 2,386,274 + +0.8 2,386,275 - +0.1 2,386,355 + +0.0 2,386,355 + -1.2 2,386,478 + ABIE51_RS10985 0.16 -0.1 2,386,637 + ABIE51_RS10985 0.27 +0.6 2,386,637 + ABIE51_RS10985 0.27 +0.1 2,386,794 - ABIE51_RS10985 0.38 +0.0 2,386,982 + ABIE51_RS10985 0.51 +0.2 2,387,073 - ABIE51_RS10985 0.58 +0.2 2,387,073 - ABIE51_RS10985 0.58 +0.1 2,387,076 - ABIE51_RS10985 0.58 +0.8 2,387,078 + ABIE51_RS10985 0.58 -0.3 2,387,246 + ABIE51_RS10985 0.70 -0.4 2,387,247 - ABIE51_RS10985 0.70 -0.2 2,387,430 - ABIE51_RS10985 0.82 +1.5 2,387,436 - ABIE51_RS10985 0.83 +1.0 2,387,470 + ABIE51_RS10985 0.85 -0.0 2,387,470 + ABIE51_RS10985 0.85 -0.4 2,387,471 - ABIE51_RS10985 0.85 +0.1 2,387,471 - ABIE51_RS10985 0.85 +0.2 2,387,474 + ABIE51_RS10985 0.85 -0.8
Or see this region's nucleotide sequence