Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS10015 and ABIE51_RS10020 are separated by 27 nucleotides ABIE51_RS10020 and ABIE51_RS10025 are separated by 34 nucleotides ABIE51_RS10025 and ABIE51_RS10030 are separated by 13 nucleotides ABIE51_RS10030 and ABIE51_RS10035 are separated by 138 nucleotides
ABIE51_RS10015: ABIE51_RS10015 - potassium-transporting ATPase subunit KdpB, at 2,155,379 to 2,157,430
_RS10015
ABIE51_RS10020: ABIE51_RS10020 - potassium-transporting ATPase subunit KdpA, at 2,157,458 to 2,159,161
_RS10020
ABIE51_RS10025: ABIE51_RS10025 - potassium-transporting ATPase subunit F, at 2,159,196 to 2,159,288
_RS10025
ABIE51_RS10030: ABIE51_RS10030 - TorF family putative porin, at 2,159,302 to 2,160,015
_RS10030
ABIE51_RS10035: ABIE51_RS10035 - glyoxylate/hydroxypyruvate reductase A, at 2,160,154 to 2,161,089
_RS10035
Position (kb)
2157
2158
2159
2160 Strain fitness (log2 ratio)
-1
0
1 at 2156.487 kb on + strand, within ABIE51_RS10015 at 2156.488 kb on - strand, within ABIE51_RS10015 at 2156.488 kb on - strand, within ABIE51_RS10015 at 2157.453 kb on - strand at 2157.705 kb on + strand, within ABIE51_RS10020 at 2157.719 kb on + strand, within ABIE51_RS10020 at 2157.762 kb on + strand, within ABIE51_RS10020 at 2157.769 kb on - strand, within ABIE51_RS10020 at 2157.769 kb on - strand, within ABIE51_RS10020 at 2157.966 kb on - strand, within ABIE51_RS10020 at 2158.269 kb on - strand, within ABIE51_RS10020 at 2158.633 kb on - strand, within ABIE51_RS10020 at 2158.633 kb on - strand, within ABIE51_RS10020 at 2158.788 kb on + strand, within ABIE51_RS10020 at 2158.788 kb on + strand, within ABIE51_RS10020 at 2158.788 kb on + strand, within ABIE51_RS10020 at 2158.789 kb on - strand, within ABIE51_RS10020 at 2158.789 kb on - strand, within ABIE51_RS10020 at 2158.789 kb on - strand, within ABIE51_RS10020 at 2158.789 kb on - strand, within ABIE51_RS10020 at 2158.812 kb on + strand, within ABIE51_RS10020 at 2159.224 kb on + strand, within ABIE51_RS10025 at 2159.225 kb on - strand, within ABIE51_RS10025 at 2159.492 kb on + strand, within ABIE51_RS10030 at 2159.496 kb on - strand, within ABIE51_RS10030 at 2159.687 kb on + strand, within ABIE51_RS10030 at 2159.688 kb on - strand, within ABIE51_RS10030 at 2159.897 kb on + strand, within ABIE51_RS10030 at 2159.898 kb on - strand, within ABIE51_RS10030 at 2160.023 kb on + strand at 2160.158 kb on + strand at 2160.159 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 2,156,487 + ABIE51_RS10015 0.54 +0.2 2,156,488 - ABIE51_RS10015 0.54 +0.5 2,156,488 - ABIE51_RS10015 0.54 -0.1 2,157,453 - +1.3 2,157,705 + ABIE51_RS10020 0.14 +0.3 2,157,719 + ABIE51_RS10020 0.15 -1.1 2,157,762 + ABIE51_RS10020 0.18 -1.1 2,157,769 - ABIE51_RS10020 0.18 +1.0 2,157,769 - ABIE51_RS10020 0.18 +0.6 2,157,966 - ABIE51_RS10020 0.30 -0.3 2,158,269 - ABIE51_RS10020 0.48 -0.9 2,158,633 - ABIE51_RS10020 0.69 -0.1 2,158,633 - ABIE51_RS10020 0.69 -0.1 2,158,788 + ABIE51_RS10020 0.78 -1.0 2,158,788 + ABIE51_RS10020 0.78 -0.2 2,158,788 + ABIE51_RS10020 0.78 -1.0 2,158,789 - ABIE51_RS10020 0.78 -0.7 2,158,789 - ABIE51_RS10020 0.78 +0.8 2,158,789 - ABIE51_RS10020 0.78 -0.4 2,158,789 - ABIE51_RS10020 0.78 +0.3 2,158,812 + ABIE51_RS10020 0.79 +0.3 2,159,224 + ABIE51_RS10025 0.30 -0.2 2,159,225 - ABIE51_RS10025 0.31 +0.1 2,159,492 + ABIE51_RS10030 0.27 -0.3 2,159,496 - ABIE51_RS10030 0.27 -0.9 2,159,687 + ABIE51_RS10030 0.54 -0.3 2,159,688 - ABIE51_RS10030 0.54 -0.0 2,159,897 + ABIE51_RS10030 0.83 -0.2 2,159,898 - ABIE51_RS10030 0.83 -0.2 2,160,023 + +0.0 2,160,158 + +0.4 2,160,159 - -0.2
Or see this region's nucleotide sequence