Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS02805 and ABIE51_RS02810 are separated by 2 nucleotides ABIE51_RS02810 and ABIE51_RS02815 are separated by 10 nucleotides ABIE51_RS02815 and ABIE51_RS02820 are separated by 118 nucleotides ABIE51_RS02820 and ABIE51_RS02825 are separated by 260 nucleotides
ABIE51_RS02805: ABIE51_RS02805 - potassium transporter Kup, at 622,882 to 624,771
_RS02805
ABIE51_RS02810: ABIE51_RS02810 - hypothetical protein, at 624,774 to 624,932
_RS02810
ABIE51_RS02815: ABIE51_RS02815 - hypothetical protein, at 624,943 to 625,125
_RS02815
ABIE51_RS02820: ABIE51_RS02820 - cupin domain-containing protein, at 625,244 to 625,672
_RS02820
ABIE51_RS02825: ABIE51_RS02825 - 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD, at 625,933 to 626,688
_RS02825
Position (kb) 624
625
626 Strain fitness (log2 ratio) -1
0
1
2
3 at 624.212 kb on + strand, within ABIE51_RS02805 at 624.213 kb on - strand, within ABIE51_RS02805 at 624.365 kb on - strand, within ABIE51_RS02805 at 624.769 kb on + strand at 624.790 kb on - strand, within ABIE51_RS02810 at 624.865 kb on + strand, within ABIE51_RS02810 at 624.866 kb on - strand, within ABIE51_RS02810 at 624.866 kb on - strand, within ABIE51_RS02810 at 624.871 kb on + strand, within ABIE51_RS02810 at 624.872 kb on - strand, within ABIE51_RS02810 at 624.872 kb on - strand, within ABIE51_RS02810 at 624.872 kb on - strand, within ABIE51_RS02810 at 624.872 kb on - strand, within ABIE51_RS02810 at 625.077 kb on - strand, within ABIE51_RS02815 at 625.200 kb on + strand at 625.407 kb on + strand, within ABIE51_RS02820 at 625.408 kb on - strand, within ABIE51_RS02820 at 625.408 kb on - strand, within ABIE51_RS02820 at 625.410 kb on + strand, within ABIE51_RS02820 at 625.410 kb on + strand, within ABIE51_RS02820 at 625.411 kb on - strand, within ABIE51_RS02820 at 625.411 kb on - strand, within ABIE51_RS02820 at 625.411 kb on - strand, within ABIE51_RS02820 at 625.411 kb on - strand, within ABIE51_RS02820 at 625.587 kb on + strand, within ABIE51_RS02820 at 625.587 kb on + strand, within ABIE51_RS02820 at 625.588 kb on - strand, within ABIE51_RS02820 at 625.982 kb on + strand at 625.982 kb on + strand at 625.983 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 624,212 + ABIE51_RS02805 0.70 -0.5 624,213 - ABIE51_RS02805 0.70 -0.2 624,365 - ABIE51_RS02805 0.78 -0.6 624,769 + -0.2 624,790 - ABIE51_RS02810 0.10 +0.2 624,865 + ABIE51_RS02810 0.57 -0.4 624,866 - ABIE51_RS02810 0.58 -0.7 624,866 - ABIE51_RS02810 0.58 +0.1 624,871 + ABIE51_RS02810 0.61 +0.6 624,872 - ABIE51_RS02810 0.62 -1.5 624,872 - ABIE51_RS02810 0.62 +0.0 624,872 - ABIE51_RS02810 0.62 +0.4 624,872 - ABIE51_RS02810 0.62 +0.7 625,077 - ABIE51_RS02815 0.73 +2.1 625,200 + -0.7 625,407 + ABIE51_RS02820 0.38 +2.9 625,408 - ABIE51_RS02820 0.38 +0.9 625,408 - ABIE51_RS02820 0.38 -0.1 625,410 + ABIE51_RS02820 0.39 -0.3 625,410 + ABIE51_RS02820 0.39 -0.5 625,411 - ABIE51_RS02820 0.39 -0.8 625,411 - ABIE51_RS02820 0.39 -1.2 625,411 - ABIE51_RS02820 0.39 -0.2 625,411 - ABIE51_RS02820 0.39 +0.3 625,587 + ABIE51_RS02820 0.80 -0.5 625,587 + ABIE51_RS02820 0.80 -1.0 625,588 - ABIE51_RS02820 0.80 -0.9 625,982 + +0.4 625,982 + -0.5 625,983 - +0.5
Or see this region's nucleotide sequence