Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5292

Experiment: D-Galactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf1N1B4_5291 and Pf1N1B4_5292 are separated by 986 nucleotides Pf1N1B4_5291 - Putative reductase, at 44,935 to 46,248 _5291 Pf1N1B4_5292 - hypothetical protein, at 47,235 to 47,396 _5292 Position (kb) 47 48Strain fitness (log2 ratio) -2 -1 0 1 2 3at 46.256 kb on - strandat 46.256 kb on - strandat 46.325 kb on + strandat 46.326 kb on - strandat 46.389 kb on - strandat 46.421 kb on + strandat 46.422 kb on - strandat 46.532 kb on - strandat 46.542 kb on + strandat 46.574 kb on - strandat 46.574 kb on - strandat 46.786 kb on + strandat 46.786 kb on + strandat 46.786 kb on + strandat 46.786 kb on + strandat 46.786 kb on + strandat 46.787 kb on - strandat 46.787 kb on - strandat 46.787 kb on - strandat 46.844 kb on + strandat 46.844 kb on + strandat 46.845 kb on - strandat 46.927 kb on + strandat 47.002 kb on + strandat 47.002 kb on + strandat 47.002 kb on + strandat 47.018 kb on + strandat 47.019 kb on - strandat 47.032 kb on + strandat 47.032 kb on + strandat 47.032 kb on + strandat 47.033 kb on - strandat 47.066 kb on + strandat 47.204 kb on + strandat 47.355 kb on + strand, within Pf1N1B4_5292at 47.355 kb on + strand, within Pf1N1B4_5292at 47.355 kb on + strand, within Pf1N1B4_5292at 47.356 kb on - strand, within Pf1N1B4_5292at 47.466 kb on + strandat 47.467 kb on - strandat 47.568 kb on + strandat 47.569 kb on - strandat 47.620 kb on + strandat 47.620 kb on + strandat 47.620 kb on + strandat 47.620 kb on + strandat 47.620 kb on + strandat 47.637 kb on + strandat 47.639 kb on + strandat 47.639 kb on + strandat 47.670 kb on + strandat 47.670 kb on + strandat 47.670 kb on + strandat 47.670 kb on + strandat 47.670 kb on + strandat 47.670 kb on + strandat 47.670 kb on + strandat 47.670 kb on + strandat 47.670 kb on + strandat 48.013 kb on + strandat 48.013 kb on + strandat 48.013 kb on + strandat 48.013 kb on + strandat 48.013 kb on + strandat 48.013 kb on + strandat 48.013 kb on + strandat 48.021 kb on + strandat 48.021 kb on + strandat 48.048 kb on + strandat 48.049 kb on - strandat 48.049 kb on - strandat 48.057 kb on + strandat 48.108 kb on + strandat 48.108 kb on + strandat 48.108 kb on + strandat 48.355 kb on + strandat 48.369 kb on + strandat 48.369 kb on + strandat 48.369 kb on + strandat 48.369 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose (C)
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46,256 - -0.5
46,256 - -0.1
46,325 + -0.1
46,326 - -0.0
46,389 - -1.1
46,421 + +0.6
46,422 - +0.8
46,532 - +1.4
46,542 + -0.2
46,574 - +0.2
46,574 - +1.2
46,786 + -0.5
46,786 + -0.2
46,786 + -0.2
46,786 + -0.2
46,786 + -0.5
46,787 - +0.6
46,787 - -0.5
46,787 - +0.2
46,844 + -0.0
46,844 + +0.2
46,845 - +1.0
46,927 + -0.1
47,002 + +2.8
47,002 + -1.0
47,002 + +0.8
47,018 + -0.3
47,019 - -0.3
47,032 + -0.3
47,032 + +0.2
47,032 + +0.8
47,033 - +1.2
47,066 + -0.9
47,204 + -0.2
47,355 + Pf1N1B4_5292 0.74 -1.4
47,355 + Pf1N1B4_5292 0.74 -0.8
47,355 + Pf1N1B4_5292 0.74 -0.1
47,356 - Pf1N1B4_5292 0.75 -0.4
47,466 + -1.0
47,467 - +0.5
47,568 + -0.7
47,569 - -0.2
47,620 + +1.2
47,620 + +0.8
47,620 + +1.0
47,620 + -1.2
47,620 + -1.8
47,637 + +0.2
47,639 + +1.3
47,639 + +0.7
47,670 + -0.0
47,670 + +1.3
47,670 + -0.0
47,670 + +0.6
47,670 + -0.8
47,670 + -0.2
47,670 + +0.8
47,670 + -0.8
47,670 + +2.8
48,013 + -1.0
48,013 + +1.4
48,013 + +1.2
48,013 + -0.8
48,013 + -0.5
48,013 + +0.5
48,013 + +0.8
48,021 + -0.1
48,021 + -0.2
48,048 + +0.6
48,049 - -0.2
48,049 - +1.3
48,057 + +0.6
48,108 + +1.2
48,108 + -1.0
48,108 + +1.0
48,355 + -0.9
48,369 + +0.9
48,369 + +0.3
48,369 + +0.8
48,369 + -1.0

Or see this region's nucleotide sequence