Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_01092 and CCNA_01093 overlap by 16 nucleotides CCNA_01093 and CCNA_01094 are separated by 126 nucleotides CCNA_01094 and CCNA_01095 are separated by 294 nucleotides CCNA_01095 and CCNA_01096 are separated by 157 nucleotides
CCNA_01092: CCNA_01092 - ACT domain protein, at 1,198,379 to 1,198,681
_01092
CCNA_01093: CCNA_01093 - hypothetical protein, at 1,198,666 to 1,198,962
_01093
CCNA_01094: CCNA_01094 - hypothetical protein, at 1,199,089 to 1,199,238
_01094
CCNA_01095: CCNA_01095 - phenylalanyl-tRNA synthetase beta chain, at 1,199,533 to 1,201,932
_01095
CCNA_01096: CCNA_01096 - phenylalanyl-tRNA synthetase alpha chain, at 1,202,090 to 1,203,163
_01096
Position (kb)
1199
1200
1201
1202 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1198.556 kb on - strand, within CCNA_01092 at 1198.563 kb on + strand, within CCNA_01092 at 1198.565 kb on + strand, within CCNA_01092 at 1198.573 kb on + strand, within CCNA_01092 at 1198.583 kb on + strand, within CCNA_01092 at 1198.585 kb on + strand, within CCNA_01092 at 1198.604 kb on - strand, within CCNA_01092 at 1198.651 kb on + strand at 1198.651 kb on + strand at 1198.651 kb on + strand at 1198.651 kb on + strand at 1198.651 kb on + strand at 1198.651 kb on + strand at 1198.659 kb on - strand at 1198.659 kb on - strand at 1198.659 kb on - strand at 1198.659 kb on - strand at 1198.659 kb on - strand at 1198.817 kb on + strand, within CCNA_01093 at 1198.840 kb on + strand, within CCNA_01093 at 1198.848 kb on - strand, within CCNA_01093 at 1198.869 kb on + strand, within CCNA_01093 at 1198.887 kb on - strand, within CCNA_01093 at 1198.938 kb on - strand at 1198.948 kb on + strand at 1198.956 kb on - strand at 1198.965 kb on + strand at 1198.979 kb on - strand at 1198.979 kb on - strand at 1198.988 kb on + strand at 1198.988 kb on + strand at 1198.996 kb on - strand at 1198.996 kb on - strand at 1198.998 kb on + strand at 1199.028 kb on + strand at 1199.041 kb on - strand at 1199.041 kb on - strand at 1199.115 kb on - strand, within CCNA_01094 at 1199.150 kb on - strand, within CCNA_01094 at 1199.160 kb on - strand, within CCNA_01094 at 1199.189 kb on + strand, within CCNA_01094 at 1199.229 kb on - strand at 1199.266 kb on + strand at 1199.266 kb on + strand at 1199.266 kb on + strand at 1199.266 kb on + strand at 1199.272 kb on + strand at 1199.274 kb on - strand at 1199.274 kb on - strand at 1199.274 kb on - strand at 1199.274 kb on - strand at 1199.274 kb on - strand at 1199.294 kb on + strand at 1199.302 kb on - strand at 1199.342 kb on + strand at 1199.350 kb on - strand at 1199.352 kb on + strand at 1199.391 kb on + strand at 1199.435 kb on + strand at 1199.500 kb on - strand at 1199.520 kb on + strand at 1201.995 kb on - strand at 1202.050 kb on - strand at 1202.076 kb on - strand at 1202.076 kb on - strand at 1202.078 kb on - strand at 1202.096 kb on - strand at 1202.101 kb on - strand at 1202.101 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 1,198,556 - CCNA_01092 0.58 +1.2 1,198,563 + CCNA_01092 0.61 -1.5 1,198,565 + CCNA_01092 0.61 -0.8 1,198,573 + CCNA_01092 0.64 +1.2 1,198,583 + CCNA_01092 0.67 +2.8 1,198,585 + CCNA_01092 0.68 -1.2 1,198,604 - CCNA_01092 0.74 +1.6 1,198,651 + -1.4 1,198,651 + -1.5 1,198,651 + -1.1 1,198,651 + -0.4 1,198,651 + -0.7 1,198,651 + -0.0 1,198,659 - +1.3 1,198,659 - +1.4 1,198,659 - +0.6 1,198,659 - -0.8 1,198,659 - +1.1 1,198,817 + CCNA_01093 0.51 -0.5 1,198,840 + CCNA_01093 0.59 +0.3 1,198,848 - CCNA_01093 0.61 +2.3 1,198,869 + CCNA_01093 0.68 -0.3 1,198,887 - CCNA_01093 0.74 +0.6 1,198,938 - +1.2 1,198,948 + +0.5 1,198,956 - +2.3 1,198,965 + +0.9 1,198,979 - +1.0 1,198,979 - +0.7 1,198,988 + +0.6 1,198,988 + -1.2 1,198,996 - +1.4 1,198,996 - +1.0 1,198,998 + -1.0 1,199,028 + +0.8 1,199,041 - +3.6 1,199,041 - +3.6 1,199,115 - CCNA_01094 0.17 +3.5 1,199,150 - CCNA_01094 0.41 +3.3 1,199,160 - CCNA_01094 0.47 +2.6 1,199,189 + CCNA_01094 0.67 -2.7 1,199,229 - +3.4 1,199,266 + +1.6 1,199,266 + -1.2 1,199,266 + -1.2 1,199,266 + +0.2 1,199,272 + -2.5 1,199,274 - +3.0 1,199,274 - +2.9 1,199,274 - +2.9 1,199,274 - +1.6 1,199,274 - +2.5 1,199,294 + -0.1 1,199,302 - -0.7 1,199,342 + +0.3 1,199,350 - -0.9 1,199,352 + +0.8 1,199,391 + -0.1 1,199,435 + -1.1 1,199,500 - +1.8 1,199,520 + -0.6 1,201,995 - +1.4 1,202,050 - +0.9 1,202,076 - +1.4 1,202,076 - +1.0 1,202,078 - +1.4 1,202,096 - +1.6 1,202,101 - +1.4 1,202,101 - +1.4
Or see this region's nucleotide sequence