Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2319 and SMa2321 are separated by 537 nucleotides SMa2321 and SMa2323 are separated by 324 nucleotides SMa2323 and SMa2325 are separated by 223 nucleotides
SMa2319: SMa2319 - gst14 glutatione S-transferase, at 1,292,162 to 1,292,809
SMa2319
SMa2321: SMa2321 - UvrD2 DNA helicase, at 1,293,347 to 1,295,416
SMa2321
SMa2323: SMa2323 - hypothetical protein, at 1,295,741 to 1,296,166
SMa2323
SMa2325: SMa2325 - transcriptional regulator, at 1,296,390 to 1,297,082
SMa2325
Position (kb)
1293
1294
1295
1296 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1292.540 kb on + strand, within SMa2319 at 1292.656 kb on - strand, within SMa2319 at 1292.724 kb on - strand, within SMa2319 at 1292.724 kb on - strand, within SMa2319 at 1292.753 kb on + strand at 1292.836 kb on + strand at 1292.903 kb on + strand at 1292.903 kb on + strand at 1292.904 kb on - strand at 1292.904 kb on - strand at 1292.912 kb on + strand at 1293.052 kb on - strand at 1293.075 kb on + strand at 1293.091 kb on + strand at 1293.091 kb on + strand at 1293.091 kb on + strand at 1293.091 kb on + strand at 1293.091 kb on + strand at 1293.092 kb on - strand at 1293.092 kb on - strand at 1293.092 kb on - strand at 1293.092 kb on - strand at 1293.136 kb on - strand at 1293.136 kb on - strand at 1293.136 kb on - strand at 1293.285 kb on + strand at 1293.332 kb on + strand at 1293.333 kb on - strand at 1293.405 kb on - strand at 1293.696 kb on - strand, within SMa2321 at 1293.771 kb on + strand, within SMa2321 at 1293.839 kb on + strand, within SMa2321 at 1293.840 kb on - strand, within SMa2321 at 1293.840 kb on - strand, within SMa2321 at 1293.893 kb on + strand, within SMa2321 at 1293.894 kb on - strand, within SMa2321 at 1293.904 kb on - strand, within SMa2321 at 1293.944 kb on + strand, within SMa2321 at 1293.999 kb on - strand, within SMa2321 at 1293.999 kb on - strand, within SMa2321 at 1294.076 kb on + strand, within SMa2321 at 1294.262 kb on + strand, within SMa2321 at 1294.263 kb on - strand, within SMa2321 at 1294.833 kb on + strand, within SMa2321 at 1294.833 kb on + strand, within SMa2321 at 1294.833 kb on + strand, within SMa2321 at 1294.834 kb on - strand, within SMa2321 at 1294.834 kb on - strand, within SMa2321 at 1294.834 kb on - strand, within SMa2321 at 1294.875 kb on + strand, within SMa2321 at 1295.016 kb on + strand, within SMa2321 at 1295.030 kb on + strand, within SMa2321 at 1295.030 kb on + strand, within SMa2321 at 1295.030 kb on + strand, within SMa2321 at 1295.031 kb on - strand, within SMa2321 at 1295.031 kb on - strand, within SMa2321 at 1295.031 kb on - strand, within SMa2321 at 1295.031 kb on - strand, within SMa2321 at 1295.031 kb on - strand, within SMa2321 at 1295.035 kb on + strand, within SMa2321 at 1295.036 kb on - strand, within SMa2321 at 1295.171 kb on + strand, within SMa2321 at 1295.172 kb on - strand, within SMa2321 at 1295.172 kb on - strand, within SMa2321 at 1295.179 kb on + strand, within SMa2321 at 1295.180 kb on - strand, within SMa2321 at 1295.267 kb on + strand at 1295.360 kb on - strand at 1295.414 kb on + strand at 1295.488 kb on - strand at 1295.540 kb on - strand at 1295.540 kb on - strand at 1295.540 kb on - strand at 1295.540 kb on - strand at 1295.555 kb on + strand at 1295.556 kb on - strand at 1295.556 kb on - strand at 1295.625 kb on - strand at 1295.625 kb on - strand at 1295.634 kb on + strand at 1295.635 kb on - strand at 1295.645 kb on + strand at 1295.646 kb on - strand at 1295.682 kb on + strand at 1295.695 kb on + strand at 1295.695 kb on + strand at 1295.723 kb on + strand at 1295.724 kb on - strand at 1295.811 kb on + strand, within SMa2323 at 1295.909 kb on + strand, within SMa2323 at 1295.909 kb on + strand, within SMa2323 at 1295.937 kb on - strand, within SMa2323 at 1295.937 kb on - strand, within SMa2323 at 1295.996 kb on + strand, within SMa2323 at 1295.996 kb on + strand, within SMa2323 at 1295.996 kb on + strand, within SMa2323 at 1296.042 kb on - strand, within SMa2323 at 1296.122 kb on - strand, within SMa2323 at 1296.122 kb on - strand, within SMa2323 at 1296.122 kb on - strand, within SMa2323 at 1296.164 kb on + strand at 1296.165 kb on - strand at 1296.220 kb on + strand at 1296.220 kb on + strand at 1296.220 kb on + strand at 1296.221 kb on - strand at 1296.221 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,292,540 + SMa2319 0.58 -0.1 1,292,656 - SMa2319 0.76 -0.3 1,292,724 - SMa2319 0.87 -0.5 1,292,724 - SMa2319 0.87 -1.0 1,292,753 + -0.2 1,292,836 + +0.4 1,292,903 + -0.6 1,292,903 + +1.0 1,292,904 - -0.6 1,292,904 - -1.0 1,292,912 + -0.5 1,293,052 - +0.0 1,293,075 + +0.0 1,293,091 + -0.3 1,293,091 + -0.4 1,293,091 + -0.0 1,293,091 + +0.5 1,293,091 + -0.3 1,293,092 - -1.0 1,293,092 - -0.3 1,293,092 - +0.1 1,293,092 - +0.1 1,293,136 - -0.1 1,293,136 - -0.1 1,293,136 - +0.2 1,293,285 + +0.6 1,293,332 + +0.2 1,293,333 - +0.1 1,293,405 - -0.6 1,293,696 - SMa2321 0.17 -2.6 1,293,771 + SMa2321 0.20 +0.2 1,293,839 + SMa2321 0.24 -0.4 1,293,840 - SMa2321 0.24 -0.4 1,293,840 - SMa2321 0.24 -0.2 1,293,893 + SMa2321 0.26 -0.7 1,293,894 - SMa2321 0.26 +0.3 1,293,904 - SMa2321 0.27 +0.9 1,293,944 + SMa2321 0.29 -0.6 1,293,999 - SMa2321 0.31 +2.1 1,293,999 - SMa2321 0.31 -0.1 1,294,076 + SMa2321 0.35 +1.4 1,294,262 + SMa2321 0.44 -0.7 1,294,263 - SMa2321 0.44 +0.0 1,294,833 + SMa2321 0.72 -0.5 1,294,833 + SMa2321 0.72 +0.6 1,294,833 + SMa2321 0.72 +0.1 1,294,834 - SMa2321 0.72 -0.2 1,294,834 - SMa2321 0.72 -0.4 1,294,834 - SMa2321 0.72 -1.6 1,294,875 + SMa2321 0.74 +0.1 1,295,016 + SMa2321 0.81 -0.3 1,295,030 + SMa2321 0.81 -0.9 1,295,030 + SMa2321 0.81 -1.6 1,295,030 + SMa2321 0.81 -0.5 1,295,031 - SMa2321 0.81 +0.7 1,295,031 - SMa2321 0.81 -0.2 1,295,031 - SMa2321 0.81 -0.2 1,295,031 - SMa2321 0.81 +0.1 1,295,031 - SMa2321 0.81 +0.1 1,295,035 + SMa2321 0.82 +0.1 1,295,036 - SMa2321 0.82 -0.1 1,295,171 + SMa2321 0.88 -0.2 1,295,172 - SMa2321 0.88 +0.0 1,295,172 - SMa2321 0.88 -0.6 1,295,179 + SMa2321 0.89 -0.5 1,295,180 - SMa2321 0.89 -1.4 1,295,267 + +0.2 1,295,360 - +0.7 1,295,414 + -0.6 1,295,488 - +0.4 1,295,540 - -0.3 1,295,540 - +0.2 1,295,540 - +0.5 1,295,540 - -0.1 1,295,555 + +0.9 1,295,556 - -0.0 1,295,556 - -0.4 1,295,625 - -0.0 1,295,625 - -0.5 1,295,634 + -0.4 1,295,635 - -0.2 1,295,645 + -1.0 1,295,646 - -0.2 1,295,682 + -0.9 1,295,695 + +0.2 1,295,695 + -0.1 1,295,723 + +1.1 1,295,724 - +1.4 1,295,811 + SMa2323 0.16 +0.2 1,295,909 + SMa2323 0.39 -0.5 1,295,909 + SMa2323 0.39 -0.8 1,295,937 - SMa2323 0.46 -0.2 1,295,937 - SMa2323 0.46 -2.0 1,295,996 + SMa2323 0.60 -0.1 1,295,996 + SMa2323 0.60 +0.2 1,295,996 + SMa2323 0.60 +0.2 1,296,042 - SMa2323 0.71 +0.1 1,296,122 - SMa2323 0.89 -0.2 1,296,122 - SMa2323 0.89 -0.0 1,296,122 - SMa2323 0.89 +0.0 1,296,164 + +0.6 1,296,165 - +0.4 1,296,220 + +1.6 1,296,220 + -0.8 1,296,220 + -1.2 1,296,221 - -0.4 1,296,221 - -0.6
Or see this region's nucleotide sequence