Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02235 and HSERO_RS02240 are separated by 8 nucleotides HSERO_RS02240 and HSERO_RS02245 are separated by 185 nucleotides HSERO_RS02245 and HSERO_RS02250 are separated by 130 nucleotides
HSERO_RS02235: HSERO_RS02235 - membrane protein, at 488,946 to 489,752
_RS02235
HSERO_RS02240: HSERO_RS02240 - homoserine kinase, at 489,761 to 490,717
_RS02240
HSERO_RS02245: HSERO_RS02245 - hypothetical protein, at 490,903 to 491,343
_RS02245
HSERO_RS02250: HSERO_RS02250 - hypothetical protein, at 491,474 to 492,166
_RS02250
Position (kb) 489
490
491 Strain fitness (log2 ratio) -2
-1
0
1 at 488.944 kb on + strand at 488.980 kb on - strand at 489.000 kb on - strand at 489.019 kb on - strand at 489.037 kb on + strand, within HSERO_RS02235 at 489.168 kb on - strand, within HSERO_RS02235 at 489.168 kb on - strand, within HSERO_RS02235 at 489.325 kb on + strand, within HSERO_RS02235 at 489.464 kb on - strand, within HSERO_RS02235 at 489.696 kb on - strand at 489.762 kb on - strand at 490.003 kb on - strand, within HSERO_RS02240 at 490.909 kb on - strand at 491.043 kb on - strand, within HSERO_RS02245 at 491.075 kb on - strand, within HSERO_RS02245 at 491.095 kb on - strand, within HSERO_RS02245 at 491.326 kb on + strand at 491.392 kb on + strand at 491.446 kb on - strand at 491.495 kb on + strand at 491.503 kb on - strand at 491.713 kb on + strand, within HSERO_RS02250
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 488,944 + +0.1 488,980 - +0.7 489,000 - -2.4 489,019 - -0.1 489,037 + HSERO_RS02235 0.11 +1.0 489,168 - HSERO_RS02235 0.28 +1.0 489,168 - HSERO_RS02235 0.28 +1.1 489,325 + HSERO_RS02235 0.47 +1.7 489,464 - HSERO_RS02235 0.64 -1.2 489,696 - -1.1 489,762 - +0.7 490,003 - HSERO_RS02240 0.25 -2.3 490,909 - +0.7 491,043 - HSERO_RS02245 0.32 -1.1 491,075 - HSERO_RS02245 0.39 -1.4 491,095 - HSERO_RS02245 0.44 -0.7 491,326 + -1.6 491,392 + +0.3 491,446 - +0.6 491,495 + +0.1 491,503 - +0.7 491,713 + HSERO_RS02250 0.34 +0.2
Or see this region's nucleotide sequence