Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37465

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,883,393	+		RR42_RS37460	0.59	+0.0
3,883,768	+		RR42_RS37460	0.89	-2.1
3,883,768	+		RR42_RS37460	0.89	-0.3
3,883,768	+		RR42_RS37460	0.89	+1.3
3,883,782	+				-0.1
3,883,782	+				+0.1
3,883,794	-				+1.7
3,883,957	+				-0.3
3,884,031	+				-0.7
3,884,032	-				+0.7
3,884,032	-				+0.0
3,884,032	-				-0.1
3,884,032	-				+0.8
3,884,356	-				+0.1
3,884,356	-				+1.3
3,884,473	-		RR42_RS37465	0.11	-0.2
3,884,473	-		RR42_RS37465	0.11	-0.8
3,884,621	+		RR42_RS37465	0.27	-2.4
3,884,715	+		RR42_RS37465	0.38	+2.4
3,884,715	+		RR42_RS37465	0.38	-0.8
3,884,715	+		RR42_RS37465	0.38	-0.5
3,884,716	-		RR42_RS37465	0.38	-1.3
3,884,762	-		RR42_RS37465	0.43	-0.4
3,884,762	-		RR42_RS37465	0.43	-1.4
3,884,787	-		RR42_RS37465	0.46	-0.6
3,884,787	-		RR42_RS37465	0.46	+0.2
3,884,787	-		RR42_RS37465	0.46	+0.0
3,884,787	-		RR42_RS37465	0.46	+0.3
3,884,914	+		RR42_RS37465	0.60	+0.1
3,884,915	-		RR42_RS37465	0.60	+0.4
3,884,915	-		RR42_RS37465	0.60	-1.1
3,884,915	-		RR42_RS37465	0.60	+1.7
3,884,936	+		RR42_RS37465	0.62	+0.8
3,885,255	-				+1.0
3,885,413	+				-0.2
3,885,414	-				+0.0
3,885,414	-				-0.5
3,885,439	+				-0.3
3,885,439	+				-0.8
3,885,439	+				+0.2
3,885,439	+				-0.3
3,885,517	+				-1.9
3,885,550	+		RR42_RS37470	0.11	+1.0
3,885,551	-		RR42_RS37470	0.11	-0.5
3,885,551	-		RR42_RS37470	0.11	+1.0
3,885,611	-		RR42_RS37470	0.18	+0.6
3,885,641	+		RR42_RS37470	0.22	+0.1
3,885,813	-		RR42_RS37470	0.45	+0.4
3,885,813	-		RR42_RS37470	0.45	+0.1
3,885,944	-		RR42_RS37470	0.62	+0.5
3,885,944	-		RR42_RS37470	0.62	-0.4
3,885,944	-		RR42_RS37470	0.62	-0.4
3,885,952	+		RR42_RS37470	0.63	+0.2
3,885,952	+		RR42_RS37470	0.63	-0.9
3,885,952	+		RR42_RS37470	0.63	-0.9
3,885,952	+		RR42_RS37470	0.63	+0.5
3,885,952	+		RR42_RS37470	0.63	+0.8
3,885,953	-		RR42_RS37470	0.63	+1.1
3,885,953	-		RR42_RS37470	0.63	+0.3
3,886,017	+		RR42_RS37470	0.71	+0.4
3,886,037	+		RR42_RS37470	0.74	+1.2
3,886,037	+		RR42_RS37470	0.74	-0.0
3,886,038	-		RR42_RS37470	0.74	+0.7
3,886,038	-		RR42_RS37470	0.74	-2.0
3,886,038	-		RR42_RS37470	0.74	-0.2
3,886,038	-		RR42_RS37470	0.74	-0.7
3,886,038	-		RR42_RS37470	0.74	+0.2
3,886,057	+		RR42_RS37470	0.76	+1.5
3,886,058	-		RR42_RS37470	0.76	-0.8
3,886,219	+				+0.2
3,886,219	+				+0.1
3,886,219	+				-0.3
3,886,220	-				-1.8
3,886,238	-				+0.0
3,886,238	-				-1.1