Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37240

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,818,115	+		RR42_RS37235	0.33	+0.1
3,818,116	-		RR42_RS37235	0.34	+0.4
3,818,116	-		RR42_RS37235	0.34	+0.9
3,818,224	+		RR42_RS37235	0.77	-0.2
3,818,224	+		RR42_RS37235	0.77	+1.4
3,818,224	+		RR42_RS37235	0.77	+0.2
3,818,224	+		RR42_RS37235	0.77	-3.4
3,818,225	-		RR42_RS37235	0.77	-0.2
3,818,225	-		RR42_RS37235	0.77	+0.4
3,818,225	-		RR42_RS37235	0.77	-0.5
3,818,227	+		RR42_RS37235	0.78	+0.4
3,818,228	-		RR42_RS37235	0.78	-0.1
3,818,254	+		RR42_RS37235	0.88	+2.0
3,818,254	+		RR42_RS37235	0.88	-1.8
3,818,255	-		RR42_RS37235	0.89	-0.1
3,818,255	-		RR42_RS37235	0.89	+0.3
3,818,255	-		RR42_RS37235	0.89	+0.8
3,818,265	-				+1.5
3,818,336	+				-0.4
3,818,419	-				+0.5
3,818,482	-				+1.4
3,818,482	-				-2.0
3,818,538	-				-1.1
3,818,545	+				+0.0
3,818,610	-				+0.1
3,818,723	+				+0.5
3,818,763	-				-0.1
3,818,776	+				+0.5
3,818,776	+				+0.1
3,818,776	+				+0.8
3,818,776	+				+0.2
3,818,777	-				+2.0
3,818,777	-				-0.4
3,818,777	-				-1.0
3,818,779	+				+0.0
3,818,926	+				+0.6
3,818,926	+				+1.2
3,818,926	+				+0.2
3,818,926	+				-0.3
3,818,926	+				-1.1
3,818,927	-				+0.5
3,818,984	+				-0.3
3,818,985	-				+0.8
3,819,032	+				-1.5
3,819,033	-				+1.0
3,819,043	-				+0.2
3,819,073	+				-0.5
3,819,238	-		RR42_RS37240	0.40	-0.7
3,819,467	+				-0.9
3,819,502	+				-0.2
3,819,508	+				-1.7
3,819,565	-				+0.6
3,819,565	-				-0.3
3,819,574	+				+0.4
3,819,579	+				+0.2
3,819,598	+				-1.0
3,819,648	-				+0.1
3,819,741	+				-1.5
3,819,741	+				-0.3
3,819,742	-				-1.0
3,819,742	-				+1.5
3,819,751	+				-2.9
3,819,752	-				+2.0
3,819,752	-				-1.1
3,819,775	+				+0.3
3,819,776	-				+0.0
3,819,818	-				+0.0
3,819,836	+				+0.5
3,819,837	-				-0.7
3,819,837	-				-0.3
3,819,910	+				+1.3
3,819,911	-				-0.8
3,819,911	-				-2.0
3,819,947	+				-0.1
3,819,948	-				-0.5
3,819,948	-				-0.8
3,820,013	+				+0.2
3,820,013	+				+0.3
3,820,013	+				+2.0
3,820,014	-				+2.0
3,820,016	+				-2.2
3,820,016	+				+0.6
3,820,016	+				-1.9
3,820,017	-				-0.4
3,820,017	-				+0.1
3,820,017	-				+1.2
3,820,043	-				+0.7
3,820,062	-				-0.3
3,820,062	-				-0.2
3,820,062	-				+0.8
3,820,064	+				+1.3
3,820,064	+				-0.1
3,820,064	+				+0.4
3,820,065	-				-0.5
3,820,065	-				+0.7
3,820,065	-				-0.2
3,820,065	-				+0.2
3,820,065	-				-0.5
3,820,072	+				+1.5
3,820,073	-				-0.0
3,820,118	+				+0.2
3,820,118	+				+0.7
3,820,119	-				+0.3
3,820,119	-				+0.2
3,820,268	-				+0.2
3,820,268	-				-1.4
3,820,269	+				+0.6
3,820,270	-				+0.5
3,820,270	-				+0.6
3,820,270	-				+0.5
3,820,329	-				-2.1
3,820,365	+				+1.5
3,820,366	-				-1.1
3,820,366	-				-1.1
3,820,402	+				+0.1
3,820,444	+				+0.1
3,820,473	+				-0.2
3,820,477	+				-2.2
3,820,478	-				+0.2
3,820,478	-				+2.0