Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37105

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,787,864	-		RR42_RS37095	0.84	-1.3
3,787,893	+		RR42_RS37095	0.88	-0.1
3,787,965	+				-0.2
3,787,966	-				+0.7
3,788,003	+				-0.5
3,788,004	-				-1.0
3,788,016	+				-1.0
3,788,016	+				+0.0
3,788,017	-				-0.2
3,788,017	-				+0.3
3,788,017	-				+0.5
3,788,056	+				+0.3
3,788,123	+				-0.3
3,788,123	+				-1.0
3,788,124	-				-0.3
3,788,246	+				-0.9
3,788,246	+				+0.6
3,788,341	+				-1.1
3,788,341	+				+0.1
3,788,342	-				-1.2
3,788,403	+				-0.3
3,788,453	-				-0.3
3,788,453	-				+0.5
3,788,500	+				+1.5
3,788,500	+				-1.3
3,788,500	+				+0.1
3,788,501	-				+0.7
3,788,549	+				+0.8
3,788,549	+				+0.2
3,788,549	+				+0.4
3,788,550	-				+1.0
3,788,632	-				-0.4
3,788,674	+				-0.6
3,788,737	+				+0.4
3,788,738	-				-1.4
3,788,738	-				-0.0
3,788,738	-				+0.7
3,788,738	-				+0.2
3,788,800	-				-1.1
3,788,800	-				+1.0
3,788,882	+		RR42_RS37105	0.19	-0.7
3,788,896	+		RR42_RS37105	0.24	+1.0
3,788,897	+		RR42_RS37105	0.25	-1.3
3,788,898	-		RR42_RS37105	0.25	+1.5
3,788,898	-		RR42_RS37105	0.25	+1.4
3,788,898	-		RR42_RS37105	0.25	+0.5
3,788,900	+		RR42_RS37105	0.26	+0.0
3,788,901	-		RR42_RS37105	0.26	-1.1
3,788,901	-		RR42_RS37105	0.26	+3.0
3,788,901	-		RR42_RS37105	0.26	-0.6
3,788,901	-		RR42_RS37105	0.26	-1.5
3,788,909	+		RR42_RS37105	0.30	-1.0
3,788,909	+		RR42_RS37105	0.30	+1.0
3,788,910	-		RR42_RS37105	0.30	-0.2
3,788,910	-		RR42_RS37105	0.30	-0.2
3,788,910	-		RR42_RS37105	0.30	-0.0
3,788,910	-		RR42_RS37105	0.30	+0.2
3,788,910	-		RR42_RS37105	0.30	+0.0
3,788,912	+		RR42_RS37105	0.31	-0.3
3,788,912	+		RR42_RS37105	0.31	-0.1
3,788,913	-		RR42_RS37105	0.31	+1.0
3,788,955	+		RR42_RS37105	0.48	+0.4
3,788,955	+		RR42_RS37105	0.48	+0.6
3,788,956	-		RR42_RS37105	0.49	+1.2
3,789,088	+				+0.5
3,789,088	+				+1.1
3,789,089	-				+0.0
3,789,139	+				+0.2
3,789,140	-				+2.5
3,789,140	-				-0.4
3,789,140	-				-0.8
3,789,160	-				+2.0
3,789,459	+		RR42_RS37110	0.73	+0.8
3,789,459	+		RR42_RS37110	0.73	+0.2
3,789,459	+		RR42_RS37110	0.73	+2.0
3,789,460	-		RR42_RS37110	0.74	+1.2
3,789,530	+		RR42_RS37110	0.89	-1.0
3,789,599	+				-2.7
3,789,624	+				+0.4
3,789,624	+				-0.4
3,789,624	+				+0.0
3,789,681	+				+1.0
3,789,681	+				+0.2
3,789,681	+				-0.1
3,789,681	+				+1.6
3,789,813	-				+0.0
3,789,831	+				+0.8
3,789,863	+				+0.5
3,789,863	+				+0.6
3,789,863	+				-1.1
3,789,864	-				+0.0
3,789,864	-				-1.4
3,789,886	+				-0.2
3,789,886	+				+0.5
3,789,887	-				+0.2
3,790,011	-		RR42_RS37115	0.68	-0.1