Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36850

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,717,997	+		RR42_RS36845	0.16	+0.1
3,718,057	+		RR42_RS36845	0.25	-0.7
3,718,057	+		RR42_RS36845	0.25	+0.0
3,718,057	+		RR42_RS36845	0.25	+0.6
3,718,058	-		RR42_RS36845	0.25	+1.0
3,718,058	-		RR42_RS36845	0.25	+1.3
3,718,517	+				+0.7
3,718,517	+				+0.3
3,718,518	-				-1.2
3,718,556	-				+0.1
3,718,556	-				-2.4
3,718,720	+				+0.4
3,718,720	+				+0.5
3,718,721	-				-0.4
3,718,721	-				-0.2
3,718,721	-				-0.9
3,718,742	-				-0.2
3,718,742	-				-1.5
3,718,869	+				-0.5
3,718,870	-				-0.0
3,718,876	+				-0.3
3,718,876	+				-0.1
3,718,979	+				+0.8
3,718,979	+				-0.9
3,718,980	-				-0.3
3,719,042	+		RR42_RS36850	0.15	-0.0
3,719,042	+		RR42_RS36850	0.15	-2.4
3,719,043	-		RR42_RS36850	0.15	-3.0
3,719,065	-		RR42_RS36850	0.18	-0.1
3,719,065	-		RR42_RS36850	0.18	+0.5
3,719,159	+		RR42_RS36850	0.29	+1.2
3,719,159	+		RR42_RS36850	0.29	-0.1
3,719,159	+		RR42_RS36850	0.29	-0.9
3,719,159	+		RR42_RS36850	0.29	+0.3
3,719,159	+		RR42_RS36850	0.29	-2.0
3,719,159	+		RR42_RS36850	0.29	+1.7
3,719,160	-		RR42_RS36850	0.29	-2.5
3,719,160	-		RR42_RS36850	0.29	-1.4
3,719,160	-		RR42_RS36850	0.29	-0.6
3,719,197	+		RR42_RS36850	0.33	-1.5
3,719,197	+		RR42_RS36850	0.33	-0.0
3,719,259	+		RR42_RS36850	0.40	-1.3
3,719,260	-		RR42_RS36850	0.40	-1.0
3,719,260	-		RR42_RS36850	0.40	-1.3
3,719,270	+		RR42_RS36850	0.41	-0.0
3,719,271	-		RR42_RS36850	0.41	-2.0
3,719,279	+		RR42_RS36850	0.42	+0.2
3,719,348	+		RR42_RS36850	0.50	+0.5
3,719,348	+		RR42_RS36850	0.50	-1.4
3,719,450	+		RR42_RS36850	0.62	+0.9
3,719,450	+		RR42_RS36850	0.62	-0.3
3,719,450	+		RR42_RS36850	0.62	+1.3
3,719,450	+		RR42_RS36850	0.62	-2.2
3,719,450	+		RR42_RS36850	0.62	-0.4
3,719,451	-		RR42_RS36850	0.62	+0.0
3,719,451	-		RR42_RS36850	0.62	-0.6
3,719,451	-		RR42_RS36850	0.62	-0.0
3,719,588	+		RR42_RS36850	0.77	-1.0
3,719,588	+		RR42_RS36850	0.77	+0.4
3,719,588	+		RR42_RS36850	0.77	-0.5
3,719,589	-		RR42_RS36850	0.77	-1.0
3,719,589	-		RR42_RS36850	0.77	+1.5
3,719,589	-		RR42_RS36850	0.77	-0.1
3,719,589	-		RR42_RS36850	0.77	-0.3
3,719,589	-		RR42_RS36850	0.77	-0.3
3,719,591	-		RR42_RS36850	0.78	+0.3
3,719,591	-		RR42_RS36850	0.78	+0.2
3,719,591	-		RR42_RS36850	0.78	-0.5
3,719,636	-		RR42_RS36850	0.83	-0.3
3,719,649	+		RR42_RS36850	0.84	+0.0
3,719,671	-		RR42_RS36850	0.87	-0.6
3,719,674	+		RR42_RS36850	0.87	-1.3
3,719,675	-		RR42_RS36850	0.87	+0.0
3,719,675	-		RR42_RS36850	0.87	+0.9
3,719,726	-				+0.5
3,719,786	+				+3.0
3,719,787	-				-0.2
3,719,787	-				-0.6
3,719,787	-				-0.2
3,719,932	+				-1.2
3,719,933	-				-1.8
3,719,933	-				+0.4
3,719,933	-				+0.0
3,719,976	-				+0.2
3,720,010	+				-0.4
3,720,010	+				-0.7
3,720,011	-				-0.9
3,720,047	+				+0.5
3,720,048	-				+0.5
3,720,198	+				-0.1
3,720,198	+				-1.3
3,720,198	+				+0.5
3,720,199	-				-0.8
3,720,199	-				+2.4
3,720,199	-				-0.5
3,720,239	+				+0.5
3,720,330	+				+1.2
3,720,331	-				-0.0
3,720,331	-				+0.5
3,720,331	-				-0.2
3,720,335	+				+1.6
3,720,336	-				-1.2
3,720,336	-				-0.4
3,720,356	-				-0.3
3,720,387	+				-1.0
3,720,437	-				-0.6
3,720,450	-				-1.5
3,720,450	-				-0.3
3,720,450	-				+1.2
3,720,482	+				-1.4
3,720,482	+				-0.1
3,720,482	+				+1.2
3,720,483	-				-0.9
3,720,483	-				+0.3
3,720,501	-				-0.5
3,720,501	-				+0.6
3,720,564	+				-0.5
3,720,564	+				+0.4
3,720,637	+				-1.5
3,720,638	-				-1.0
3,720,656	+				+0.4
3,720,657	-				-2.1
3,720,683	+				-0.9
3,720,699	-				+1.0
3,720,699	-				-0.8
3,720,714	+				+0.7
3,720,715	+				-0.8
3,720,715	+				-1.2
3,720,715	+				-0.8
3,720,715	+				+0.0
3,720,717	+				-0.6
3,720,717	+				-1.6
3,720,717	+				+2.8
3,720,717	+				-0.5
3,720,718	-				+0.7
3,720,718	-				+1.0
3,720,718	-				+0.5
3,720,719	+				+0.2
3,720,719	+				-0.3
3,720,719	+				+1.6
3,720,719	+				+0.0
3,720,720	-				-0.4
3,720,720	-				+1.0
3,720,720	-				-1.3
3,720,766	+				-0.5