Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35935

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,509,856	+		RR42_RS35930	0.79	-0.8
3,510,237	+				-0.3
3,510,237	+				-2.4
3,510,237	+				+0.0
3,510,237	+				-0.6
3,510,238	-				-1.6
3,510,348	+				-0.6
3,510,348	+				-0.6
3,510,348	+				-1.5
3,510,349	-				+1.4
3,510,432	-				+0.9
3,510,565	-				-2.2
3,510,776	+		RR42_RS35935	0.24	-2.0
3,510,777	-		RR42_RS35935	0.24	-1.2
3,510,777	-		RR42_RS35935	0.24	+1.4
3,510,777	-		RR42_RS35935	0.24	-1.8
3,510,777	-		RR42_RS35935	0.24	-0.3
3,510,951	-		RR42_RS35935	0.39	-1.9
3,510,971	+		RR42_RS35935	0.41	-0.3
3,510,972	-		RR42_RS35935	0.41	+1.0
3,511,254	-		RR42_RS35935	0.66	-0.1
3,511,265	+		RR42_RS35935	0.67	-1.1
3,511,266	-		RR42_RS35935	0.67	+0.8
3,511,273	+		RR42_RS35935	0.67	-0.6
3,511,273	+		RR42_RS35935	0.67	-0.4
3,511,273	+		RR42_RS35935	0.67	+0.7
3,511,274	-		RR42_RS35935	0.67	-2.9
3,511,274	-		RR42_RS35935	0.67	-0.4
3,511,274	-		RR42_RS35935	0.67	-1.2
3,511,499	+		RR42_RS35935	0.87	-0.8
3,511,499	+		RR42_RS35935	0.87	-1.4
3,511,499	+		RR42_RS35935	0.87	-1.9
3,511,500	-		RR42_RS35935	0.87	-1.4
3,511,606	+				-0.8
3,511,607	-				+0.4
3,511,666	+				-1.7
3,511,666	+				+0.0
3,511,667	-				-1.7
3,511,707	+				-2.4
3,511,707	+				-1.0
3,511,707	+				-0.7
3,511,707	+				+1.6
3,511,708	-				-1.4
3,511,758	+				-0.8
3,511,759	-				-0.3
3,511,828	+				+1.1
3,511,828	+				+2.6
3,511,828	+				-0.4
3,511,828	+				-1.0
3,511,828	+				-1.0
3,511,829	-				-0.4
3,511,829	-				-0.2
3,511,921	+				-1.0
3,511,922	-				+0.2
3,511,971	+				+3.0
3,511,971	+				-1.5
3,512,391	+		RR42_RS35940	0.44	+1.2
3,512,392	-		RR42_RS35940	0.45	+0.5
3,512,478	+		RR42_RS35940	0.54	-0.3
3,512,478	+		RR42_RS35940	0.54	+2.0
3,512,479	-		RR42_RS35940	0.54	+0.0
3,512,479	-		RR42_RS35940	0.54	+0.5
3,512,479	-		RR42_RS35940	0.54	+0.4
3,512,479	-		RR42_RS35940	0.54	-1.6
3,512,613	+		RR42_RS35940	0.68	-1.8
3,512,614	-		RR42_RS35940	0.68	-0.2