Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35545

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,428,036	-				+0.0
3,428,036	-				+0.4
3,428,036	-				+0.6
3,428,036	-				+0.1
3,428,036	-				+1.3
3,428,036	-				-1.5
3,428,036	-				+0.4
3,428,036	-				-1.2
3,428,036	-				-0.1
3,428,071	+				+0.9
3,428,072	-				-0.6
3,428,072	-				-0.4
3,428,123	+				+0.2
3,428,124	-				+0.1
3,428,129	+				-1.6
3,428,129	+				+0.1
3,428,129	+				-0.5
3,428,130	-				-0.7
3,428,203	-				+0.2
3,428,216	+				-0.4
3,428,216	+				-0.4
3,428,216	+				+0.2
3,428,217	-				-0.2
3,428,217	-				-1.0
3,428,217	-				+0.8
3,428,276	-				-1.2
3,428,293	+				-0.5
3,428,293	+				-1.1
3,428,293	+				-1.3
3,428,293	+				-1.7
3,428,302	+				-0.2
3,428,302	+				+1.0
3,428,320	+				-1.2
3,428,320	+				+0.8
3,428,321	-				+1.7
3,428,321	-				+0.4
3,428,321	-				+0.9
3,428,339	+				-0.3
3,428,340	-				-0.3
3,428,358	-				-1.0
3,428,375	+				-0.3
3,428,577	+				+0.5
3,428,674	+				-0.1
3,428,675	-				-0.6
3,428,675	-				-0.3
3,428,675	-				-1.2
3,428,756	+				+0.9
3,428,757	-				-0.4
3,428,849	+				-0.8
3,428,992	+				-1.0
3,429,026	+				+0.0
3,429,027	-				+0.6
3,429,027	-				-0.1
3,429,063	+				+0.0
3,429,064	-				+0.1
3,429,064	-				+0.6
3,429,086	-				+0.4
3,429,086	-				-0.2
3,429,086	-				-0.3
3,429,086	-				-0.1
3,429,171	+		RR42_RS35545	0.19	-0.7
3,429,171	+		RR42_RS35545	0.19	-1.3
3,429,184	+		RR42_RS35545	0.20	-0.6
3,429,185	-		RR42_RS35545	0.20	-0.5
3,429,185	-		RR42_RS35545	0.20	+0.5
3,429,342	+		RR42_RS35545	0.42	+0.9
3,429,342	+		RR42_RS35545	0.42	-0.4
3,429,413	-		RR42_RS35545	0.52	+0.8
3,429,442	+		RR42_RS35545	0.56	+0.1
3,429,442	+		RR42_RS35545	0.56	-0.8
3,429,447	-		RR42_RS35545	0.56	-0.2
3,429,457	+		RR42_RS35545	0.58	-0.3
3,429,458	-		RR42_RS35545	0.58	-0.7
3,429,532	-		RR42_RS35545	0.68	+0.0
3,429,555	-		RR42_RS35545	0.71	+0.1
3,429,555	-		RR42_RS35545	0.71	+0.8
3,429,562	-		RR42_RS35545	0.72	-1.1
3,429,562	-		RR42_RS35545	0.72	-1.9
3,429,603	+		RR42_RS35545	0.78	-1.2
3,429,664	+		RR42_RS35545	0.86	-0.5
3,429,664	+		RR42_RS35545	0.86	-1.4
3,429,664	+		RR42_RS35545	0.86	-0.3
3,429,665	-		RR42_RS35545	0.86	+1.8
3,429,665	-		RR42_RS35545	0.86	-2.0
3,429,668	+		RR42_RS35545	0.87	-3.2
3,429,672	+		RR42_RS35545	0.87	+0.4
3,429,672	+		RR42_RS35545	0.87	-2.2
3,429,673	-		RR42_RS35545	0.87	-0.6
3,429,673	-		RR42_RS35545	0.87	-2.4
3,429,673	-		RR42_RS35545	0.87	+0.0
3,429,701	+				-2.5
3,429,702	-				+2.0
3,429,793	+				+0.6
3,429,855	+		RR42_RS35550	0.12	+0.4
3,429,856	-		RR42_RS35550	0.12	-0.4
3,429,856	-		RR42_RS35550	0.12	+0.6
3,429,861	+		RR42_RS35550	0.13	-0.2
3,429,861	+		RR42_RS35550	0.13	-0.1
3,429,862	-		RR42_RS35550	0.13	-0.5
3,429,895	-		RR42_RS35550	0.18	+0.9
3,429,921	+		RR42_RS35550	0.22	+1.4
3,429,921	+		RR42_RS35550	0.22	-0.2
3,429,922	-		RR42_RS35550	0.22	-2.1
3,429,922	-		RR42_RS35550	0.22	-0.1
3,429,975	+		RR42_RS35550	0.30	-0.5
3,429,975	+		RR42_RS35550	0.30	-0.5
3,429,975	+		RR42_RS35550	0.30	+0.4
3,429,976	-		RR42_RS35550	0.30	-0.3
3,430,076	+		RR42_RS35550	0.44	+0.3
3,430,076	+		RR42_RS35550	0.44	+1.4
3,430,077	-		RR42_RS35550	0.44	+0.6
3,430,190	-		RR42_RS35550	0.61	+1.2
3,430,323	+		RR42_RS35550	0.80	+0.5
3,430,324	-		RR42_RS35550	0.80	+0.5
3,430,376	+		RR42_RS35550	0.88	+0.0
3,430,376	+		RR42_RS35550	0.88	+0.8
3,430,377	-		RR42_RS35550	0.88	+0.9
3,430,501	+				-0.0
3,430,501	+				+0.0
3,430,501	+				+1.3
3,430,501	+				+1.6
3,430,502	-				-2.4
3,430,502	-				-0.3
3,430,502	-				+0.4
3,430,502	-				+3.0
3,430,502	-				-1.9
3,430,561	+				+0.4
3,430,562	-				-1.3
3,430,562	-				-0.5
3,430,562	-				+0.8
3,430,562	-				-0.7
3,430,562	-				-1.2
3,430,562	-				-0.3
3,430,597	+				-2.2
3,430,756	+		RR42_RS35555	0.19	+0.3
3,430,756	+		RR42_RS35555	0.19	+0.6
3,430,756	+		RR42_RS35555	0.19	-0.6
3,430,757	-		RR42_RS35555	0.19	+0.5
3,430,757	-		RR42_RS35555	0.19	+0.1
3,430,757	-		RR42_RS35555	0.19	+0.0