Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34105

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,079,730	-		RR42_RS34100	0.49	-0.6
3,079,730	-		RR42_RS34100	0.49	+0.8
3,079,736	+		RR42_RS34100	0.50	-0.3
3,079,736	+		RR42_RS34100	0.50	-0.3
3,079,737	-		RR42_RS34100	0.50	+2.3
3,079,909	-		RR42_RS34100	0.61	-1.0
3,080,025	-		RR42_RS34100	0.68	+0.2
3,080,025	-		RR42_RS34100	0.68	+2.0
3,080,098	-		RR42_RS34100	0.73	-0.8
3,080,115	+		RR42_RS34100	0.74	-1.9
3,080,310	+		RR42_RS34100	0.86	+0.5
3,080,318	+		RR42_RS34100	0.87	+0.6
3,080,336	+		RR42_RS34100	0.88	+1.2
3,080,336	+		RR42_RS34100	0.88	-1.5
3,080,336	+		RR42_RS34100	0.88	+0.2
3,080,337	-		RR42_RS34100	0.88	+0.6
3,080,337	-		RR42_RS34100	0.88	+0.2
3,080,357	+		RR42_RS34100	0.90	+0.4
3,080,455	+				-1.6
3,080,455	+				+0.3
3,080,456	-				+0.1
3,080,491	+				+0.3
3,080,491	+				+0.6
3,080,491	+				-1.4
3,080,492	-				+0.8
3,080,492	-				-0.5
3,080,492	-				-2.1
3,080,492	-				+0.8
3,080,494	-				-2.2
3,080,494	-				-0.8
3,080,738	+				-0.1
3,080,756	-				+0.0
3,080,845	+		RR42_RS34105	0.12	-0.5
3,080,915	+		RR42_RS34105	0.19	-0.5
3,080,915	+		RR42_RS34105	0.19	-0.2
3,080,915	+		RR42_RS34105	0.19	-0.8
3,080,915	+		RR42_RS34105	0.19	-0.0
3,080,916	-		RR42_RS34105	0.19	+0.1
3,080,916	-		RR42_RS34105	0.19	-1.7
3,080,916	-		RR42_RS34105	0.19	+1.0
3,080,918	+		RR42_RS34105	0.19	+0.1
3,080,918	+		RR42_RS34105	0.19	-0.8
3,080,994	+		RR42_RS34105	0.27	+1.6
3,080,994	+		RR42_RS34105	0.27	-1.0
3,081,090	-		RR42_RS34105	0.37	+0.2
3,081,139	+		RR42_RS34105	0.42	-0.3
3,081,239	-		RR42_RS34105	0.52	+0.8
3,081,299	+		RR42_RS34105	0.58	-0.2
3,081,299	+		RR42_RS34105	0.58	-1.9
3,081,299	+		RR42_RS34105	0.58	+0.1
3,081,300	-		RR42_RS34105	0.58	-1.0
3,081,300	-		RR42_RS34105	0.58	-0.5
3,081,303	-		RR42_RS34105	0.58	-0.7
3,081,311	+		RR42_RS34105	0.59	+0.9
3,081,312	-		RR42_RS34105	0.59	+0.4
3,081,351	+		RR42_RS34105	0.63	-0.7
3,081,399	+		RR42_RS34105	0.68	+0.6
3,081,399	+		RR42_RS34105	0.68	-0.5
3,081,400	-		RR42_RS34105	0.68	+1.7
3,081,400	-		RR42_RS34105	0.68	-1.8
3,081,476	-		RR42_RS34105	0.76	+0.1
3,081,594	+		RR42_RS34105	0.88	-0.1
3,081,595	-		RR42_RS34105	0.88	+1.6
3,081,595	-		RR42_RS34105	0.88	+0.0
3,081,595	-		RR42_RS34105	0.88	+2.6
3,081,595	-		RR42_RS34105	0.88	+0.8
3,081,597	+		RR42_RS34105	0.88	-2.0
3,081,598	-		RR42_RS34105	0.88	-1.0
3,081,598	-		RR42_RS34105	0.88	-1.8
3,081,606	+		RR42_RS34105	0.89	-0.5
3,081,606	+		RR42_RS34105	0.89	-1.5
3,081,644	+				-0.9
3,081,645	-				-0.4
3,081,732	-				-2.8
3,081,834	+				-0.3
3,081,841	+				+0.8
3,081,841	+				-0.0
3,081,890	+				-1.1
3,081,891	-				-0.0
3,081,891	-				-1.8
3,081,966	+				+0.4
3,082,043	+				+0.8
3,082,043	+				+0.8
3,082,044	-				+0.7
3,082,044	-				-0.6
3,082,044	-				-0.0
3,082,131	+		RR42_RS34110	0.15	-0.6
3,082,131	+		RR42_RS34110	0.15	+1.1
3,082,132	-		RR42_RS34110	0.15	-0.8
3,082,132	-		RR42_RS34110	0.15	-0.7
3,082,132	-		RR42_RS34110	0.15	-0.4
3,082,132	-		RR42_RS34110	0.15	-0.3
3,082,134	-		RR42_RS34110	0.15	+1.3
3,082,134	-		RR42_RS34110	0.15	-0.3
3,082,134	-		RR42_RS34110	0.15	+2.0
3,082,519	+		RR42_RS34110	0.44	-1.3
3,082,555	-		RR42_RS34110	0.46	+0.2
3,082,604	+		RR42_RS34110	0.50	+0.8
3,082,689	+		RR42_RS34110	0.56	+1.4
3,082,690	-		RR42_RS34110	0.56	-0.1
3,082,698	+		RR42_RS34110	0.57	-0.8