Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32905

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,780,982	-		RR42_RS32900	0.50	-0.1
2,781,129	+		RR42_RS32900	0.60	+3.3
2,781,131	+		RR42_RS32900	0.60	-0.4
2,781,131	+		RR42_RS32900	0.60	-1.0
2,781,131	+		RR42_RS32900	0.60	+0.3
2,781,131	+		RR42_RS32900	0.60	+0.6
2,781,132	-		RR42_RS32900	0.60	-0.9
2,781,132	-		RR42_RS32900	0.60	-0.1
2,781,132	-		RR42_RS32900	0.60	+0.1
2,781,132	-		RR42_RS32900	0.60	-1.1
2,781,132	-		RR42_RS32900	0.60	-0.6
2,781,132	-		RR42_RS32900	0.60	+0.1
2,781,132	-		RR42_RS32900	0.60	+0.6
2,781,444	-		RR42_RS32900	0.80	-1.5
2,781,536	+		RR42_RS32900	0.87	-0.6
2,781,536	+		RR42_RS32900	0.87	+1.1
2,781,560	+		RR42_RS32900	0.88	+1.2
2,781,561	-		RR42_RS32900	0.88	-0.1
2,781,830	-				-0.5
2,782,039	+				-0.6
2,783,004	+		RR42_RS32905	0.82	-0.9
2,783,004	+		RR42_RS32905	0.82	-0.8
2,783,005	-		RR42_RS32905	0.82	-0.3
2,783,062	+		RR42_RS32905	0.86	-2.1
2,783,063	-		RR42_RS32905	0.86	+0.4
2,783,342	+				+0.6
2,783,342	+				-1.5
2,783,342	+				-0.4
2,783,342	+				+0.9
2,783,342	+				+0.5
2,783,342	+				-0.0
2,783,623	-		RR42_RS32910	0.18	+0.1
2,783,805	+		RR42_RS32910	0.38	+0.5
2,783,844	+		RR42_RS32910	0.43	-1.2
2,783,847	+		RR42_RS32910	0.43	-0.1
2,783,848	-		RR42_RS32910	0.43	-1.9
2,783,848	-		RR42_RS32910	0.43	+0.3
2,784,030	+		RR42_RS32910	0.63	-2.8
2,784,031	-		RR42_RS32910	0.63	+0.1
2,784,031	-		RR42_RS32910	0.63	+0.6
2,784,031	-		RR42_RS32910	0.63	-2.1
2,784,031	-		RR42_RS32910	0.63	-1.6
2,784,036	+		RR42_RS32910	0.64	-0.3
2,784,037	-		RR42_RS32910	0.64	-1.1
2,784,180	+		RR42_RS32910	0.79	-0.5
2,784,180	+		RR42_RS32910	0.79	-1.1
2,784,181	-		RR42_RS32910	0.79	+0.1
2,784,181	-		RR42_RS32910	0.79	-1.2
2,784,189	+		RR42_RS32910	0.80	+0.8
2,784,189	+		RR42_RS32910	0.80	+0.9