Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32390

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,660,614	-				+0.7
2,660,625	+				+0.7
2,661,001	+		RR42_RS32385	0.45	+1.3
2,661,002	-		RR42_RS32385	0.45	+1.4
2,661,002	-		RR42_RS32385	0.45	-0.5
2,661,074	-		RR42_RS32385	0.53	+1.4
2,661,293	-		RR42_RS32385	0.78	-0.7
2,661,424	+				-1.2
2,661,424	+				-1.1
2,661,424	+				+0.3
2,661,424	+				+1.0
2,661,425	-				-1.3
2,661,425	-				+0.4
2,661,425	-				+0.6
2,661,425	-				+1.2
2,661,436	+				-2.4
2,661,655	+				+0.3
2,661,656	-				-1.3
2,661,656	-				-0.1
2,661,874	+		RR42_RS32390	0.27	-0.4
2,662,225	+		RR42_RS32390	0.55	-0.3
2,662,225	+		RR42_RS32390	0.55	-0.4
2,662,226	-		RR42_RS32390	0.56	+0.1
2,662,226	-		RR42_RS32390	0.56	+0.1
2,662,345	+		RR42_RS32390	0.65	-1.0
2,662,345	+		RR42_RS32390	0.65	+0.0
2,662,345	+		RR42_RS32390	0.65	+0.7
2,662,345	+		RR42_RS32390	0.65	-0.1
2,662,345	+		RR42_RS32390	0.65	+0.4
2,662,514	-		RR42_RS32390	0.79	-1.5
2,662,514	-		RR42_RS32390	0.79	-1.0
2,662,516	+		RR42_RS32390	0.79	-0.5
2,662,516	+		RR42_RS32390	0.79	+0.8
2,662,517	-		RR42_RS32390	0.79	-0.7
2,662,557	-		RR42_RS32390	0.82	-0.2
2,662,585	+		RR42_RS32390	0.85	-0.8
2,662,586	-		RR42_RS32390	0.85	+0.2
2,662,586	-		RR42_RS32390	0.85	-0.0
2,662,726	+				-2.7
2,662,727	-				+0.7
2,662,727	-				+1.6
2,662,727	-				-0.5
2,662,764	+				-1.0
2,662,764	+				+0.4
2,662,765	-				-1.0
2,662,789	+				-0.1
2,663,149	-		RR42_RS32395	0.22	-0.3
2,663,205	+		RR42_RS32395	0.29	+0.5
2,663,335	+		RR42_RS32395	0.47	+1.4
2,663,371	+		RR42_RS32395	0.52	+0.7
2,663,371	+		RR42_RS32395	0.52	+0.5
2,663,372	-		RR42_RS32395	0.52	+0.7
2,663,372	-		RR42_RS32395	0.52	+2.2
2,663,452	+		RR42_RS32395	0.63	+0.3
2,663,452	+		RR42_RS32395	0.63	+0.7
2,663,652	+				+0.0
2,663,711	+				-1.5
2,663,711	+				+0.5
2,663,712	-				-1.0
2,663,712	-				+0.6
2,663,712	-				+0.4