Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31930
Experiment: R2A with Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,540,874 | - | -0.8 | |||
2,541,051 | + | RR42_RS31930 | 0.21 | -0.9 | |
2,541,086 | + | RR42_RS31930 | 0.24 | +1.0 | |
2,541,527 | + | RR42_RS31930 | 0.62 | +0.0 | |
2,541,528 | - | RR42_RS31930 | 0.62 | -0.4 | |
2,541,740 | + | RR42_RS31930 | 0.80 | +0.7 | |
2,541,741 | - | RR42_RS31930 | 0.80 | -1.0 | |
2,541,741 | - | RR42_RS31930 | 0.80 | -2.0 | |
2,541,962 | + | +0.1 | |||
2,542,074 | + | RR42_RS31935 | 0.11 | +1.2 | |
2,542,075 | - | RR42_RS31935 | 0.11 | +0.7 | |
2,542,077 | - | RR42_RS31935 | 0.12 | +1.1 | |
2,542,110 | - | RR42_RS31935 | 0.16 | -0.8 | |
2,542,302 | - | RR42_RS31935 | 0.40 | +0.0 | |
2,542,302 | - | RR42_RS31935 | 0.40 | +0.0 | |
2,542,416 | + | RR42_RS31935 | 0.55 | +0.4 | |
2,542,517 | + | RR42_RS31935 | 0.68 | +0.6 | |
2,542,518 | - | RR42_RS31935 | 0.68 | +1.0 | |
2,542,775 | - | +0.7 |
Or see this region's nucleotide sequence