Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31380

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,416,103	+		RR42_RS31375	0.25	+0.5
2,416,103	+		RR42_RS31375	0.25	-1.1
2,416,103	+		RR42_RS31375	0.25	-0.6
2,416,104	-		RR42_RS31375	0.25	+1.6
2,416,104	-		RR42_RS31375	0.25	-0.8
2,416,105	+		RR42_RS31375	0.26	+0.5
2,416,106	-		RR42_RS31375	0.26	-0.6
2,416,106	-		RR42_RS31375	0.26	+1.3
2,416,106	-		RR42_RS31375	0.26	+0.6
2,416,106	-		RR42_RS31375	0.26	-0.9
2,416,139	+		RR42_RS31375	0.28	-1.0
2,416,139	+		RR42_RS31375	0.28	-0.0
2,416,142	-		RR42_RS31375	0.29	-0.6
2,416,570	+		RR42_RS31375	0.63	-0.2
2,416,571	-		RR42_RS31375	0.63	-0.9
2,416,571	-		RR42_RS31375	0.63	-2.0
2,416,651	+		RR42_RS31375	0.70	+0.9
2,416,651	+		RR42_RS31375	0.70	-0.6
2,416,651	+		RR42_RS31375	0.70	-2.4
2,416,862	+		RR42_RS31375	0.87	+1.5
2,416,863	-		RR42_RS31375	0.87	+1.1
2,416,980	-				-0.4
2,417,006	+				-1.1
2,417,006	+				-1.1
2,417,006	+				+0.7
2,417,006	+				+1.8
2,417,007	-				-1.3
2,417,115	-		RR42_RS31380	0.10	-0.7
2,417,237	+		RR42_RS31380	0.24	-1.2
2,417,237	+		RR42_RS31380	0.24	-1.1
2,417,237	+		RR42_RS31380	0.24	-0.0
2,417,237	+		RR42_RS31380	0.24	+1.1
2,417,237	+		RR42_RS31380	0.24	+0.9
2,417,237	+		RR42_RS31380	0.24	-0.6
2,417,238	-		RR42_RS31380	0.24	-0.2
2,417,238	-		RR42_RS31380	0.24	+1.0
2,417,238	-		RR42_RS31380	0.24	-1.1
2,417,361	-		RR42_RS31380	0.38	-0.8
2,417,361	-		RR42_RS31380	0.38	+0.5
2,417,446	+		RR42_RS31380	0.48	+0.3
2,417,446	+		RR42_RS31380	0.48	-0.7
2,417,498	+		RR42_RS31380	0.54	+0.3
2,417,735	-		RR42_RS31380	0.80	-0.3
2,417,806	+		RR42_RS31380	0.88	-0.2
2,417,907	-				+1.2
2,417,939	+				-1.1
2,417,940	-				+0.9
2,417,940	-				+0.3
2,417,956	-				-0.5
2,418,020	+				+0.5
2,418,020	+				-0.7
2,418,021	-				-0.8
2,418,177	+		RR42_RS31385	0.26	-1.0
2,418,264	-		RR42_RS31385	0.38	-1.3
2,418,274	-		RR42_RS31385	0.40	-0.4
2,418,312	+		RR42_RS31385	0.45	-0.4
2,418,312	+		RR42_RS31385	0.45	-0.1
2,418,437	+		RR42_RS31385	0.62	+0.1
2,418,438	-		RR42_RS31385	0.62	-0.3
2,418,438	-		RR42_RS31385	0.62	+0.9
2,418,438	-		RR42_RS31385	0.62	+0.1
2,418,576	-		RR42_RS31385	0.82	+1.4
2,418,576	-		RR42_RS31385	0.82	-1.2
2,418,614	+		RR42_RS31385	0.87	+1.7
2,418,614	+		RR42_RS31385	0.87	-0.8
2,418,615	-		RR42_RS31385	0.87	-0.2
2,418,771	+				+0.2
2,418,771	+				-1.0
2,418,772	-				+0.0
2,418,772	-				-0.6
2,418,772	-				-0.7
2,418,860	+				-1.5
2,418,863	-				-1.5
2,418,867	+				-1.8
2,418,867	+				+0.1
2,418,868	-				+1.1
2,418,868	-				+0.1
2,418,870	-				+0.6