Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30950

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,325,070	-		RR42_RS30945	0.31	-0.5
2,325,070	-		RR42_RS30945	0.31	+1.0
2,325,269	+		RR42_RS30945	0.46	-1.0
2,325,270	-		RR42_RS30945	0.46	+0.2
2,325,605	+		RR42_RS30945	0.72	-0.5
2,325,606	-		RR42_RS30945	0.73	+0.1
2,325,891	-				+0.4
2,325,904	+				+0.5
2,325,905	-				-0.2
2,325,956	+				+1.8
2,326,057	+				-0.8
2,326,057	+				-2.1
2,326,057	+				+0.4
2,326,057	+				-0.4
2,326,057	+				+0.1
2,326,058	-				-1.6
2,326,058	-				-0.9
2,326,058	-				+0.2
2,326,058	-				+0.5
2,326,063	+				-0.4
2,326,064	-				+1.2
2,326,064	-				+0.5
2,326,064	-				-0.9
2,326,064	-				-0.5
2,326,235	-				-0.5
2,326,278	+				-0.5
2,326,278	+				-1.2
2,326,279	-				-0.2
2,326,282	+				-0.4
2,326,282	+				-2.2
2,326,282	+				+0.1
2,326,282	+				-0.8
2,326,283	-				+1.4
2,326,283	-				+0.0
2,326,283	-				+2.4
2,326,390	+		RR42_RS30950	0.13	+1.9
2,326,391	-		RR42_RS30950	0.13	+0.5
2,326,391	-		RR42_RS30950	0.13	-0.5
2,326,391	-		RR42_RS30950	0.13	-0.5
2,326,391	-		RR42_RS30950	0.13	-0.4
2,326,444	+		RR42_RS30950	0.15	-0.8
2,326,444	+		RR42_RS30950	0.15	-0.2
2,326,445	-		RR42_RS30950	0.15	-0.5
2,326,553	-		RR42_RS30950	0.19	-0.8
2,326,588	+		RR42_RS30950	0.20	-2.3
2,326,654	+		RR42_RS30950	0.22	+1.6
2,326,654	+		RR42_RS30950	0.22	-0.5
2,326,654	+		RR42_RS30950	0.22	-1.9
2,326,679	-		RR42_RS30950	0.23	-0.7
2,326,961	-		RR42_RS30950	0.32	-1.5
2,326,961	-		RR42_RS30950	0.32	+1.0
2,327,115	+		RR42_RS30950	0.37	-1.9
2,327,115	+		RR42_RS30950	0.37	+0.4
2,327,116	-		RR42_RS30950	0.37	+0.2
2,327,116	-		RR42_RS30950	0.37	-0.4
2,327,138	-		RR42_RS30950	0.37	-0.1
2,327,138	-		RR42_RS30950	0.37	-0.7
2,327,138	-		RR42_RS30950	0.37	+0.0
2,327,359	+		RR42_RS30950	0.44	-0.5
2,327,359	+		RR42_RS30950	0.44	-1.2
2,327,360	-		RR42_RS30950	0.44	+1.4
2,327,360	-		RR42_RS30950	0.44	-1.5
2,327,360	-		RR42_RS30950	0.44	-0.5
2,327,548	+		RR42_RS30950	0.50	-1.6
2,327,548	+		RR42_RS30950	0.50	-1.2
2,327,590	+		RR42_RS30950	0.52	+0.6
2,327,592	-		RR42_RS30950	0.52	+0.2
2,327,857	+		RR42_RS30950	0.60	-0.2
2,327,858	-		RR42_RS30950	0.60	-1.4
2,327,858	-		RR42_RS30950	0.60	-1.2
2,327,962	+		RR42_RS30950	0.64	-0.7
2,327,962	+		RR42_RS30950	0.64	-0.5
2,327,963	-		RR42_RS30950	0.64	-0.3
2,328,366	+		RR42_RS30950	0.77	+0.1
2,328,366	+		RR42_RS30950	0.77	+0.1
2,328,367	-		RR42_RS30950	0.77	-1.3
2,328,367	-		RR42_RS30950	0.77	-0.9
2,328,382	+		RR42_RS30950	0.77	+1.2
2,328,382	+		RR42_RS30950	0.77	-0.2
2,328,382	+		RR42_RS30950	0.77	+1.3
2,328,382	+		RR42_RS30950	0.77	+2.0
2,328,383	-		RR42_RS30950	0.77	+0.2
2,328,383	-		RR42_RS30950	0.77	-0.5
2,328,384	+		RR42_RS30950	0.77	-1.3
2,328,385	-		RR42_RS30950	0.77	+1.6
2,328,385	-		RR42_RS30950	0.77	-0.5
2,328,410	+		RR42_RS30950	0.78	+0.4
2,328,792	-				-0.1
2,328,889	-				-0.2
2,328,952	-				-1.3
2,328,989	+				+1.0
2,328,989	+				+0.2
2,329,016	+				+0.1
2,329,016	+				+0.2
2,329,016	+				-1.5
2,329,017	-				-0.5
2,329,017	-				+1.8
2,329,017	-				+0.6
2,329,177	+				-1.5
2,329,177	+				-1.0
2,329,279	+				+1.0
2,329,400	+				+0.2
2,329,400	+				-1.0
2,329,465	+		RR42_RS30955	0.13	-0.9
2,329,711	+		RR42_RS30955	0.30	+0.2
2,329,711	+		RR42_RS30955	0.30	-1.0
2,329,714	+		RR42_RS30955	0.30	-1.6
2,329,715	-		RR42_RS30955	0.30	+0.7
2,329,868	-		RR42_RS30955	0.41	-0.9
2,329,868	-		RR42_RS30955	0.41	+0.8