Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30525

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,220,971	-		RR42_RS30520	0.21	-0.4
2,221,000	+		RR42_RS30520	0.23	+0.1
2,221,013	+		RR42_RS30520	0.25	+1.0
2,221,014	-		RR42_RS30520	0.25	+0.7
2,221,057	+		RR42_RS30520	0.29	-1.3
2,221,058	-		RR42_RS30520	0.29	+1.7
2,221,136	-		RR42_RS30520	0.36	-0.4
2,221,141	+		RR42_RS30520	0.37	-0.8
2,221,141	+		RR42_RS30520	0.37	-2.5
2,221,142	-		RR42_RS30520	0.37	-2.0
2,221,258	+		RR42_RS30520	0.48	-1.9
2,221,461	-		RR42_RS30520	0.67	+0.4
2,221,461	-		RR42_RS30520	0.67	-0.0
2,221,575	-		RR42_RS30520	0.78	-0.6
2,221,660	+		RR42_RS30520	0.86	+1.7
2,221,762	+				+1.7
2,221,762	+				+0.3
2,221,765	+				+0.7
2,221,765	+				-1.2
2,221,766	-				-0.5
2,221,766	-				-1.5
2,221,766	-				+0.7
2,221,877	+				-1.3
2,221,877	+				+0.7
2,221,878	-				-1.0
2,221,878	-				-0.3
2,221,879	+				+0.5
2,221,879	+				+0.3
2,221,893	+				+0.8
2,221,894	-				-0.9
2,221,932	-				-0.4
2,221,940	-				-1.0
2,222,007	+				+0.5
2,222,008	-				-0.4
2,222,464	+		RR42_RS30525	0.53	+2.1
2,222,464	+		RR42_RS30525	0.53	-0.3
2,222,465	-		RR42_RS30525	0.53	+0.7
2,222,465	-		RR42_RS30525	0.53	+1.7
2,222,465	-		RR42_RS30525	0.53	-0.3
2,222,465	-		RR42_RS30525	0.53	-0.4
2,222,465	-		RR42_RS30525	0.53	+1.8
2,222,465	-		RR42_RS30525	0.53	+0.3
2,222,549	-		RR42_RS30525	0.62	-0.8
2,222,549	-		RR42_RS30525	0.62	-0.6
2,222,691	+		RR42_RS30525	0.77	-1.1
2,222,691	+		RR42_RS30525	0.77	-0.9
2,222,692	-		RR42_RS30525	0.77	-0.9
2,222,692	-		RR42_RS30525	0.77	+0.1
2,222,692	-		RR42_RS30525	0.77	-0.1
2,222,703	-		RR42_RS30525	0.79	-1.2
2,222,794	+		RR42_RS30525	0.88	-1.6
2,222,794	+		RR42_RS30525	0.88	+0.7
2,222,795	-		RR42_RS30525	0.88	-0.4
2,222,947	-				+0.1
2,223,201	+		RR42_RS30530	0.17	+0.0
2,223,202	-		RR42_RS30530	0.17	-0.3
2,223,239	+		RR42_RS30530	0.20	-0.4
2,223,287	+		RR42_RS30530	0.23	+1.7
2,223,291	+		RR42_RS30530	0.24	-2.0
2,223,292	-		RR42_RS30530	0.24	-0.9
2,223,405	-		RR42_RS30530	0.32	-0.5
2,223,405	-		RR42_RS30530	0.32	+0.0
2,223,553	-		RR42_RS30530	0.42	+0.1
2,223,740	+		RR42_RS30530	0.56	+0.2
2,223,740	+		RR42_RS30530	0.56	+1.1
2,223,740	+		RR42_RS30530	0.56	+0.5
2,223,740	+		RR42_RS30530	0.56	+0.7
2,223,741	-		RR42_RS30530	0.56	-1.1
2,223,838	-		RR42_RS30530	0.63	+0.7
2,223,899	+		RR42_RS30530	0.67	-1.1
2,223,900	-		RR42_RS30530	0.67	-0.3
2,223,900	-		RR42_RS30530	0.67	+1.7
2,223,900	-		RR42_RS30530	0.67	-0.2
2,223,900	-		RR42_RS30530	0.67	-0.2
2,223,900	-		RR42_RS30530	0.67	+0.5
2,223,900	-		RR42_RS30530	0.67	-0.0
2,223,900	-		RR42_RS30530	0.67	-0.6
2,223,903	+		RR42_RS30530	0.67	-0.6
2,223,904	-		RR42_RS30530	0.68	-0.5