Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30325

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,177,691	+		RR42_RS30320	0.64	+0.6
2,177,691	+		RR42_RS30320	0.64	+0.8
2,178,034	+				-0.3
2,178,034	+				-0.2
2,178,034	+				+0.5
2,178,034	+				+0.5
2,178,035	-				+0.3
2,178,035	-				-0.3
2,178,035	-				+0.3
2,178,035	-				-0.1
2,178,038	+				+0.5
2,178,038	+				-0.1
2,178,038	+				-0.3
2,178,039	-				-0.3
2,178,039	-				-0.7
2,178,039	-				+1.4
2,178,242	-		RR42_RS30325	0.19	-1.2
2,178,268	+		RR42_RS30325	0.23	-0.3
2,178,268	+		RR42_RS30325	0.23	-1.2
2,178,269	-		RR42_RS30325	0.24	+0.5
2,178,269	-		RR42_RS30325	0.24	-0.0
2,178,582	-		RR42_RS30325	0.79	-0.9
2,178,695	+				-0.3
2,178,696	-				+1.7
2,178,696	-				+1.1
2,178,875	+				-0.1
2,178,876	-				+1.2
2,178,876	-				+0.9
2,178,876	-				-0.7
2,178,992	+				-0.1
2,178,998	+				+0.7
2,178,998	+				-1.2
2,178,998	+				-1.7
2,178,999	-				-0.6
2,178,999	-				-0.1
2,179,015	+				-0.4
2,179,015	+				+0.6
2,179,015	+				-0.2
2,179,015	+				-0.1
2,179,017	+				-1.5
2,179,017	+				-2.1
2,179,017	+				+0.1
2,179,018	-				-0.2
2,179,018	-				-1.4
2,179,018	-				+1.2
2,179,163	+				-0.6
2,179,578	+		RR42_RS30330	0.45	-0.4
2,179,579	-		RR42_RS30330	0.45	-0.4
2,179,582	+		RR42_RS30330	0.45	+0.0
2,179,582	+		RR42_RS30330	0.45	-0.8
2,179,582	+		RR42_RS30330	0.45	+0.1
2,179,583	-		RR42_RS30330	0.46	-0.3
2,179,583	-		RR42_RS30330	0.46	+0.5