Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28820

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,816,581	+		RR42_RS28815	0.24	-0.7
1,816,582	-		RR42_RS28815	0.24	-0.8
1,816,767	+		RR42_RS28815	0.43	-0.7
1,817,016	-		RR42_RS28815	0.68	-0.3
1,817,016	-		RR42_RS28815	0.68	-1.1
1,817,016	-		RR42_RS28815	0.68	-0.3
1,817,016	-		RR42_RS28815	0.68	+0.2
1,817,016	-		RR42_RS28815	0.68	+0.0
1,817,016	-		RR42_RS28815	0.68	-0.2
1,817,209	-		RR42_RS28815	0.87	-0.2
1,817,409	+				+0.3
1,817,675	-				+0.5
1,817,761	+		RR42_RS28820	0.11	+0.9
1,817,761	+		RR42_RS28820	0.11	-0.8
1,817,762	-		RR42_RS28820	0.11	+0.2
1,817,762	-		RR42_RS28820	0.11	+0.4
1,817,762	-		RR42_RS28820	0.11	-1.4
1,817,872	+		RR42_RS28820	0.16	+0.4
1,817,872	+		RR42_RS28820	0.16	-1.1
1,817,872	+		RR42_RS28820	0.16	+0.2
1,817,872	+		RR42_RS28820	0.16	+0.7
1,817,872	+		RR42_RS28820	0.16	+0.0
1,817,873	-		RR42_RS28820	0.16	+0.7
1,817,873	-		RR42_RS28820	0.16	-1.7
1,817,873	-		RR42_RS28820	0.16	+0.3
1,817,873	-		RR42_RS28820	0.16	-0.5
1,817,873	-		RR42_RS28820	0.16	-0.9
1,817,873	-		RR42_RS28820	0.16	+0.0
1,817,933	-		RR42_RS28820	0.19	-0.9
1,817,933	-		RR42_RS28820	0.19	-0.1
1,817,933	-		RR42_RS28820	0.19	-0.8
1,817,950	+		RR42_RS28820	0.20	+1.2
1,817,950	+		RR42_RS28820	0.20	+0.3
1,817,951	-		RR42_RS28820	0.20	-0.8
1,817,951	-		RR42_RS28820	0.20	+0.1
1,817,951	-		RR42_RS28820	0.20	+0.3
1,817,951	-		RR42_RS28820	0.20	-0.1
1,818,013	+		RR42_RS28820	0.23	-1.1
1,818,106	+		RR42_RS28820	0.27	-0.9
1,818,265	+		RR42_RS28820	0.34	-0.1
1,818,310	+		RR42_RS28820	0.37	+0.7
1,818,310	+		RR42_RS28820	0.37	+0.9
1,818,311	-		RR42_RS28820	0.37	+0.7
1,818,682	+		RR42_RS28820	0.54	-1.0
1,818,682	+		RR42_RS28820	0.54	+0.4
1,818,682	+		RR42_RS28820	0.54	+0.1
1,818,683	-		RR42_RS28820	0.54	+0.4
1,818,683	-		RR42_RS28820	0.54	+0.2
1,818,683	-		RR42_RS28820	0.54	+0.6
1,818,683	-		RR42_RS28820	0.54	+1.0
1,818,683	-		RR42_RS28820	0.54	+1.5
1,818,683	-		RR42_RS28820	0.54	-0.3
1,818,735	+		RR42_RS28820	0.56	-1.4
1,818,735	+		RR42_RS28820	0.56	+0.1
1,818,735	+		RR42_RS28820	0.56	-2.6
1,818,736	-		RR42_RS28820	0.57	-1.1
1,818,740	-		RR42_RS28820	0.57	-1.1
1,818,883	+		RR42_RS28820	0.63	+0.7
1,818,907	+		RR42_RS28820	0.65	-0.3
1,818,907	+		RR42_RS28820	0.65	+0.2
1,818,907	+		RR42_RS28820	0.65	+1.1
1,818,907	+		RR42_RS28820	0.65	+1.3
1,818,908	-		RR42_RS28820	0.65	-0.6
1,818,908	-		RR42_RS28820	0.65	-0.5
1,818,937	+		RR42_RS28820	0.66	-1.1
1,818,938	-		RR42_RS28820	0.66	+0.2
1,819,003	+		RR42_RS28820	0.69	+2.7
1,819,013	-		RR42_RS28820	0.70	-0.5
1,819,084	+		RR42_RS28820	0.73	+0.4
1,819,085	-		RR42_RS28820	0.73	+0.1
1,819,183	+		RR42_RS28820	0.77	-0.8
1,819,184	-		RR42_RS28820	0.78	-1.4
1,819,184	-		RR42_RS28820	0.78	+1.3
1,819,184	-		RR42_RS28820	0.78	+0.5
1,819,196	-		RR42_RS28820	0.78	+1.7
1,819,196	-		RR42_RS28820	0.78	-0.6
1,819,196	-		RR42_RS28820	0.78	-0.2
1,819,255	+		RR42_RS28820	0.81	-0.3
1,819,255	+		RR42_RS28820	0.81	+4.0
1,819,256	-		RR42_RS28820	0.81	+0.0
1,819,256	-		RR42_RS28820	0.81	+3.2
1,819,432	+		RR42_RS28820	0.89	-0.2
1,819,432	+		RR42_RS28820	0.89	+1.8
1,819,432	+		RR42_RS28820	0.89	-2.2
1,819,433	-		RR42_RS28820	0.89	-0.6
1,819,448	-		RR42_RS28820	0.90	+0.2
1,819,511	-				-0.1
1,819,525	+				-0.7
1,819,526	-				-0.1
1,819,580	-				+0.1
1,819,601	-				+0.1
1,819,660	+				-0.1
1,819,661	-				-0.0
1,819,661	-				-0.3
1,819,790	+				+0.2
1,819,791	-				-1.1
1,819,849	+				-0.9
1,819,849	+				-0.8
1,819,897	+				+0.3
1,819,897	+				+0.3
1,820,218	+		RR42_RS28825	0.21	-0.9
1,820,218	+		RR42_RS28825	0.21	-1.5
1,820,265	+		RR42_RS28825	0.23	+1.7
1,820,293	+		RR42_RS28825	0.24	-1.1
1,820,390	-		RR42_RS28825	0.28	+0.1
1,820,390	-		RR42_RS28825	0.28	-1.5
1,820,390	-		RR42_RS28825	0.28	-0.6
1,820,390	-		RR42_RS28825	0.28	-0.0
1,820,407	+		RR42_RS28825	0.29	+0.2
1,820,408	-		RR42_RS28825	0.29	+1.1
1,820,511	+		RR42_RS28825	0.33	-1.5
1,820,600	+		RR42_RS28825	0.37	+0.3
1,820,600	+		RR42_RS28825	0.37	+0.5
1,820,653	+		RR42_RS28825	0.39	+0.5