Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28450

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,741,056	-		RR42_RS28445	0.23	+1.8
1,741,056	-		RR42_RS28445	0.23	-1.4
1,741,056	-		RR42_RS28445	0.23	+0.8
1,741,062	-		RR42_RS28445	0.24	+1.4
1,741,320	-		RR42_RS28445	0.50	-1.1
1,741,478	-		RR42_RS28445	0.66	-1.2
1,741,726	+				-1.1
1,741,796	+				+0.4
1,741,796	+				+0.3
1,741,905	-				+0.7
1,741,905	-				-1.2
1,741,994	+				+0.8
1,741,995	-				+1.4
1,742,231	+		RR42_RS28450	0.27	+0.7
1,742,232	-		RR42_RS28450	0.27	+0.2
1,742,232	-		RR42_RS28450	0.27	+1.2
1,742,232	-		RR42_RS28450	0.27	+0.0
1,742,385	-		RR42_RS28450	0.38	-0.3
1,742,465	+		RR42_RS28450	0.44	+0.4
1,742,507	+		RR42_RS28450	0.47	+0.4
1,742,508	-		RR42_RS28450	0.47	+0.4
1,742,562	-		RR42_RS28450	0.51	-2.0
1,742,640	+		RR42_RS28450	0.56	+0.4
1,742,640	+		RR42_RS28450	0.56	+0.7
1,742,640	+		RR42_RS28450	0.56	+0.0
1,742,640	+		RR42_RS28450	0.56	+1.1
1,742,640	+		RR42_RS28450	0.56	+0.7
1,742,641	-		RR42_RS28450	0.57	-0.9
1,742,641	-		RR42_RS28450	0.57	-1.0
1,742,641	-		RR42_RS28450	0.57	-0.8
1,742,641	-		RR42_RS28450	0.57	-0.2
1,742,641	-		RR42_RS28450	0.57	+0.8
1,742,771	+		RR42_RS28450	0.66	-1.5
1,742,771	+		RR42_RS28450	0.66	-0.9
1,742,771	+		RR42_RS28450	0.66	+0.7
1,743,079	-		RR42_RS28450	0.88	+0.3
1,743,248	+				-1.0
1,743,249	-				-0.3
1,743,312	+				-0.2
1,743,312	+				+0.4
1,743,312	+				+1.2
1,743,365	+				-0.1
1,743,379	+				+1.4
1,743,380	-				+0.8
1,743,380	-				+0.2
1,743,380	-				-1.0
1,743,407	+				-0.6
1,743,408	-				-1.0
1,743,890	+		RR42_RS28455	0.48	+0.5
1,744,204	+		RR42_RS28455	0.79	+0.3
1,744,204	+		RR42_RS28455	0.79	-0.9
1,744,204	+		RR42_RS28455	0.79	+0.1