Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25845

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,136,631	+		RR42_RS25840	0.60	+0.0
1,136,632	-		RR42_RS25840	0.61	+0.3
1,136,784	+		RR42_RS25840	0.85	+0.4
1,136,784	+		RR42_RS25840	0.85	+0.0
1,136,785	-		RR42_RS25840	0.85	-1.2
1,136,914	-				+0.4
1,137,035	+				-0.9
1,137,217	+				-0.0
1,137,217	+				-1.0
1,137,217	+				-0.2
1,137,217	+				+0.6
1,137,218	-				+0.0
1,137,218	-				-1.3
1,137,253	+				-0.2
1,137,253	+				-1.1
1,137,433	+				-0.6
1,137,434	-				-1.0
1,137,501	+				+0.3
1,137,597	+				+0.0
1,137,654	+				+0.2
1,137,711	+		RR42_RS25845	0.13	+0.2
1,137,711	+		RR42_RS25845	0.13	+0.9
1,137,711	+		RR42_RS25845	0.13	-1.4
1,137,711	+		RR42_RS25845	0.13	+0.7
1,137,712	-		RR42_RS25845	0.13	+1.6
1,137,807	+		RR42_RS25845	0.19	-0.2
1,137,807	+		RR42_RS25845	0.19	+0.0
1,137,808	-		RR42_RS25845	0.19	-0.3
1,137,912	+		RR42_RS25845	0.25	+0.6
1,137,913	-		RR42_RS25845	0.25	+1.2
1,137,913	-		RR42_RS25845	0.25	-0.1
1,137,913	-		RR42_RS25845	0.25	-1.1
1,137,913	-		RR42_RS25845	0.25	-2.3
1,137,913	-		RR42_RS25845	0.25	-1.1
1,138,086	+		RR42_RS25845	0.36	+1.4
1,138,086	+		RR42_RS25845	0.36	-0.3
1,138,087	-		RR42_RS25845	0.36	-1.0
1,138,087	-		RR42_RS25845	0.36	-0.1
1,138,087	-		RR42_RS25845	0.36	+1.2
1,138,353	+		RR42_RS25845	0.53	-0.1
1,138,353	+		RR42_RS25845	0.53	-1.0
1,138,446	-		RR42_RS25845	0.59	+0.2
1,138,457	+		RR42_RS25845	0.60	+0.2
1,138,635	+		RR42_RS25845	0.71	+0.2
1,138,635	+		RR42_RS25845	0.71	+0.4
1,138,636	-		RR42_RS25845	0.71	+0.4
1,138,636	-		RR42_RS25845	0.71	-0.2
1,138,686	+		RR42_RS25845	0.74	-1.0
1,138,686	+		RR42_RS25845	0.74	+0.0
1,138,686	+		RR42_RS25845	0.74	+0.3
1,138,686	+		RR42_RS25845	0.74	-0.6
1,138,687	-		RR42_RS25845	0.74	+0.8
1,138,932	+		RR42_RS25845	0.90	+0.8
1,138,932	+		RR42_RS25845	0.90	+0.8
1,138,933	-		RR42_RS25845	0.90	+0.7
1,138,933	-		RR42_RS25845	0.90	+0.5
1,139,031	+				-0.1
1,139,031	+				-0.1
1,139,067	-				-0.1
1,139,094	+				-0.8
1,139,100	+				-1.2
1,139,100	+				-0.4
1,139,101	-				+0.7
1,139,101	-				-1.7
1,139,101	-				+2.2
1,139,101	-				-0.6
1,139,101	-				-0.2
1,139,104	-				+0.4
1,139,104	-				+1.2
1,139,195	+				+0.2
1,139,196	-				+0.8
1,139,371	+				-1.9
1,139,372	-				+0.6
1,139,372	-				+0.4
1,139,573	-				+1.7
1,139,587	+				+0.8
1,139,587	+				-0.8
1,139,615	-				-0.5
1,139,705	+				-2.7
1,139,705	+				-1.6
1,139,706	-				-0.8
1,139,821	+		RR42_RS25850	0.17	+1.0
1,139,821	+		RR42_RS25850	0.17	+1.0
1,139,821	+		RR42_RS25850	0.17	-0.1
1,139,821	+		RR42_RS25850	0.17	-1.1
1,139,822	-		RR42_RS25850	0.17	-0.4
1,139,822	-		RR42_RS25850	0.17	+0.2
1,139,822	-		RR42_RS25850	0.17	-0.9
1,139,907	-		RR42_RS25850	0.23	+1.0
1,139,907	-		RR42_RS25850	0.23	-0.6
1,139,976	+		RR42_RS25850	0.28	+2.0
1,139,977	-		RR42_RS25850	0.28	+1.0